Strain Fitness in Escherichia coli BL21 around ECD_03615

Experiment: Sodium-DL-Lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03614 and ECD_03615 are separated by 352 nucleotidesECD_03615 and ECD_03616 are separated by 20 nucleotides ECD_03614: ECD_03614 - fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase, at 3,802,631 to 3,804,001 _03614 ECD_03615: ECD_03615 - F1 sector of membrane-bound ATP synthase, epsilon subunit, at 3,804,354 to 3,804,773 _03615 ECD_03616: ECD_03616 - F1 sector of membrane-bound ATP synthase, beta subunit, at 3,804,794 to 3,806,176 _03616 Position (kb) 3804 3805Strain fitness (log2 ratio) -1 0 1at 3804.177 kb on + strandat 3804.188 kb on - strandat 3804.230 kb on + strandat 3804.253 kb on + strandat 3804.254 kb on - strandat 3804.268 kb on + strandat 3804.268 kb on + strandat 3804.269 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sodium-DL-Lactate
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3,804,177 + +0.2
3,804,188 - +0.1
3,804,230 + +0.3
3,804,253 + +0.1
3,804,254 - +0.4
3,804,268 + -0.7
3,804,268 + -0.2
3,804,269 - -0.9

Or see this region's nucleotide sequence