Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03843 and ECD_03844 are separated by 10 nucleotides ECD_03844 and ECD_03845 are separated by 60 nucleotides ECD_03845 and ECD_03846 are separated by 266 nucleotides
ECD_03843: ECD_03843 - N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding, at 4,063,302 to 4,064,306
_03843
ECD_03844: ECD_03844 - acetylglutamate kinase, at 4,064,317 to 4,065,090
_03844
ECD_03845: ECD_03845 - argininosuccinate lyase, at 4,065,151 to 4,066,524
_03845
ECD_03846: ECD_03846 - oxidative and nitrosative stress transcriptional regulator, at 4,066,791 to 4,067,708
_03846
Position (kb)
4065
4066
4067 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4064.254 kb on + strand at 4064.300 kb on + strand at 4064.301 kb on - strand at 4064.301 kb on - strand at 4064.304 kb on + strand at 4064.304 kb on + strand at 4064.304 kb on + strand at 4064.327 kb on + strand at 4064.327 kb on + strand at 4064.327 kb on + strand at 4064.328 kb on - strand at 4064.328 kb on - strand at 4064.332 kb on - strand at 4064.348 kb on + strand at 4064.349 kb on - strand at 4064.401 kb on + strand, within ECD_03844 at 4064.402 kb on - strand, within ECD_03844 at 4064.531 kb on + strand, within ECD_03844 at 4064.532 kb on - strand, within ECD_03844 at 4064.538 kb on + strand, within ECD_03844 at 4064.568 kb on + strand, within ECD_03844 at 4064.568 kb on + strand, within ECD_03844 at 4064.612 kb on + strand, within ECD_03844 at 4064.613 kb on - strand, within ECD_03844 at 4064.709 kb on + strand, within ECD_03844 at 4064.710 kb on - strand, within ECD_03844 at 4064.940 kb on + strand, within ECD_03844 at 4064.941 kb on - strand, within ECD_03844 at 4064.944 kb on - strand, within ECD_03844 at 4064.958 kb on - strand, within ECD_03844 at 4065.012 kb on + strand, within ECD_03844 at 4065.083 kb on + strand at 4065.088 kb on + strand at 4065.089 kb on - strand at 4065.249 kb on + strand at 4065.400 kb on - strand, within ECD_03845 at 4065.405 kb on + strand, within ECD_03845 at 4065.405 kb on + strand, within ECD_03845 at 4065.477 kb on + strand, within ECD_03845 at 4065.478 kb on - strand, within ECD_03845 at 4065.520 kb on - strand, within ECD_03845 at 4065.610 kb on + strand, within ECD_03845 at 4065.610 kb on + strand, within ECD_03845 at 4065.664 kb on + strand, within ECD_03845 at 4065.664 kb on + strand, within ECD_03845 at 4065.785 kb on + strand, within ECD_03845 at 4065.820 kb on - strand, within ECD_03845 at 4066.099 kb on + strand, within ECD_03845 at 4066.099 kb on + strand, within ECD_03845 at 4066.110 kb on + strand, within ECD_03845 at 4066.110 kb on + strand, within ECD_03845 at 4066.110 kb on + strand, within ECD_03845 at 4066.111 kb on - strand, within ECD_03845 at 4066.149 kb on + strand, within ECD_03845 at 4066.308 kb on + strand, within ECD_03845 at 4066.309 kb on - strand, within ECD_03845 at 4066.309 kb on - strand, within ECD_03845 at 4066.523 kb on - strand at 4066.532 kb on + strand at 4066.533 kb on - strand at 4066.533 kb on - strand at 4066.533 kb on - strand at 4066.534 kb on + strand at 4066.534 kb on + strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.535 kb on - strand at 4066.539 kb on - strand at 4066.541 kb on - strand at 4066.574 kb on - strand at 4066.625 kb on - strand at 4066.628 kb on + strand at 4066.629 kb on - strand at 4066.673 kb on + strand at 4066.673 kb on + strand at 4066.674 kb on - strand at 4066.707 kb on - strand at 4066.745 kb on + strand at 4066.751 kb on - strand at 4066.767 kb on + strand at 4066.796 kb on + strand at 4066.997 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.114 kb on + strand, within ECD_03846 at 4067.115 kb on - strand, within ECD_03846 at 4067.117 kb on + strand, within ECD_03846 at 4067.117 kb on + strand, within ECD_03846 at 4067.158 kb on - strand, within ECD_03846 at 4067.186 kb on - strand, within ECD_03846 at 4067.294 kb on + strand, within ECD_03846 at 4067.294 kb on + strand, within ECD_03846 at 4067.295 kb on - strand, within ECD_03846 at 4067.298 kb on + strand, within ECD_03846 at 4067.298 kb on + strand, within ECD_03846 at 4067.298 kb on + strand, within ECD_03846 at 4067.299 kb on - strand, within ECD_03846 at 4067.299 kb on - strand, within ECD_03846 at 4067.492 kb on + strand, within ECD_03846
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,064,254 + -2.7 4,064,300 + -1.1 4,064,301 - +0.3 4,064,301 - -1.5 4,064,304 + -0.7 4,064,304 + +0.5 4,064,304 + +0.0 4,064,327 + -0.7 4,064,327 + -0.4 4,064,327 + -1.7 4,064,328 - -2.9 4,064,328 - -0.7 4,064,332 - -3.5 4,064,348 + -2.3 4,064,349 - -3.1 4,064,401 + ECD_03844 0.11 -1.9 4,064,402 - ECD_03844 0.11 -2.7 4,064,531 + ECD_03844 0.28 -1.9 4,064,532 - ECD_03844 0.28 -1.8 4,064,538 + ECD_03844 0.29 -2.1 4,064,568 + ECD_03844 0.32 -1.2 4,064,568 + ECD_03844 0.32 -3.1 4,064,612 + ECD_03844 0.38 -2.3 4,064,613 - ECD_03844 0.38 -2.6 4,064,709 + ECD_03844 0.51 -1.3 4,064,710 - ECD_03844 0.51 -1.9 4,064,940 + ECD_03844 0.80 -3.1 4,064,941 - ECD_03844 0.81 -2.3 4,064,944 - ECD_03844 0.81 -2.8 4,064,958 - ECD_03844 0.83 -1.7 4,065,012 + ECD_03844 0.90 -0.2 4,065,083 + +0.2 4,065,088 + -0.4 4,065,089 - -5.2 4,065,249 + -2.2 4,065,400 - ECD_03845 0.18 -0.7 4,065,405 + ECD_03845 0.18 -2.5 4,065,405 + ECD_03845 0.18 -2.0 4,065,477 + ECD_03845 0.24 -1.7 4,065,478 - ECD_03845 0.24 -1.2 4,065,520 - ECD_03845 0.27 -1.5 4,065,610 + ECD_03845 0.33 -2.0 4,065,610 + ECD_03845 0.33 -2.1 4,065,664 + ECD_03845 0.37 -3.0 4,065,664 + ECD_03845 0.37 -1.9 4,065,785 + ECD_03845 0.46 -2.7 4,065,820 - ECD_03845 0.49 -4.5 4,066,099 + ECD_03845 0.69 -2.9 4,066,099 + ECD_03845 0.69 -2.3 4,066,110 + ECD_03845 0.70 -1.9 4,066,110 + ECD_03845 0.70 -1.1 4,066,110 + ECD_03845 0.70 -2.2 4,066,111 - ECD_03845 0.70 -2.6 4,066,149 + ECD_03845 0.73 -2.2 4,066,308 + ECD_03845 0.84 -3.8 4,066,309 - ECD_03845 0.84 -4.5 4,066,309 - ECD_03845 0.84 -2.8 4,066,523 - +0.4 4,066,532 + -0.1 4,066,533 - +0.3 4,066,533 - -0.6 4,066,533 - -0.0 4,066,534 + +0.0 4,066,534 + +0.7 4,066,535 - -0.9 4,066,535 - -0.6 4,066,535 - -0.1 4,066,535 - +0.6 4,066,535 - +0.1 4,066,539 - -0.0 4,066,541 - -0.3 4,066,574 - -0.1 4,066,625 - +0.2 4,066,628 + +0.2 4,066,629 - +0.2 4,066,673 + +0.1 4,066,673 + +0.0 4,066,674 - -0.2 4,066,707 - +0.3 4,066,745 + +0.1 4,066,751 - -0.0 4,066,767 + -0.0 4,066,796 + +0.8 4,066,997 + ECD_03846 0.22 +0.1 4,067,114 + ECD_03846 0.35 +0.6 4,067,114 + ECD_03846 0.35 +0.0 4,067,114 + ECD_03846 0.35 -0.1 4,067,114 + ECD_03846 0.35 +0.6 4,067,114 + ECD_03846 0.35 +0.4 4,067,114 + ECD_03846 0.35 +0.4 4,067,115 - ECD_03846 0.35 +0.1 4,067,117 + ECD_03846 0.36 +0.4 4,067,117 + ECD_03846 0.36 -0.3 4,067,158 - ECD_03846 0.40 -0.6 4,067,186 - ECD_03846 0.43 +0.8 4,067,294 + ECD_03846 0.55 +0.6 4,067,294 + ECD_03846 0.55 +0.3 4,067,295 - ECD_03846 0.55 -1.4 4,067,298 + ECD_03846 0.55 +1.1 4,067,298 + ECD_03846 0.55 +1.2 4,067,298 + ECD_03846 0.55 +1.1 4,067,299 - ECD_03846 0.55 -0.8 4,067,299 - ECD_03846 0.55 +0.3 4,067,492 + ECD_03846 0.76 -2.0
Or see this region's nucleotide sequence