Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03648 and ECD_03649 are separated by 64 nucleotides ECD_03649 and ECD_03650 are separated by 2 nucleotides
ECD_03648: ECD_03648 - branched-chain amino acid aminotransferase, at 3,842,726 to 3,843,655
_03648
ECD_03649: ECD_03649 - dihydroxyacid dehydratase, at 3,843,720 to 3,845,570
_03649
ECD_03650: ECD_03650 - l-threonine dehydratase, biosynthetic; also known as threonine deaminase, at 3,845,573 to 3,847,117
_03650
Position (kb)
3843
3844
3845
3846 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3842.720 kb on - strand at 3842.721 kb on + strand at 3842.747 kb on + strand at 3842.852 kb on + strand, within ECD_03648 at 3842.896 kb on + strand, within ECD_03648 at 3842.897 kb on - strand, within ECD_03648 at 3842.897 kb on - strand, within ECD_03648 at 3842.897 kb on - strand, within ECD_03648 at 3842.927 kb on + strand, within ECD_03648 at 3843.011 kb on + strand, within ECD_03648 at 3843.011 kb on + strand, within ECD_03648 at 3843.011 kb on + strand, within ECD_03648 at 3843.011 kb on + strand, within ECD_03648 at 3843.012 kb on - strand, within ECD_03648 at 3843.012 kb on - strand, within ECD_03648 at 3843.054 kb on + strand, within ECD_03648 at 3843.113 kb on + strand, within ECD_03648 at 3843.113 kb on + strand, within ECD_03648 at 3843.114 kb on - strand, within ECD_03648 at 3843.114 kb on - strand, within ECD_03648 at 3843.214 kb on + strand, within ECD_03648 at 3843.214 kb on + strand, within ECD_03648 at 3843.214 kb on + strand, within ECD_03648 at 3843.214 kb on + strand, within ECD_03648 at 3843.215 kb on - strand, within ECD_03648 at 3843.218 kb on + strand, within ECD_03648 at 3843.218 kb on + strand, within ECD_03648 at 3843.218 kb on + strand, within ECD_03648 at 3843.218 kb on + strand, within ECD_03648 at 3843.218 kb on + strand, within ECD_03648 at 3843.218 kb on + strand, within ECD_03648 at 3843.219 kb on - strand, within ECD_03648 at 3843.219 kb on - strand, within ECD_03648 at 3843.296 kb on + strand, within ECD_03648 at 3843.296 kb on + strand, within ECD_03648 at 3843.297 kb on - strand, within ECD_03648 at 3843.298 kb on + strand, within ECD_03648 at 3843.298 kb on + strand, within ECD_03648 at 3843.299 kb on - strand, within ECD_03648 at 3843.299 kb on - strand, within ECD_03648 at 3843.299 kb on - strand, within ECD_03648 at 3843.385 kb on + strand, within ECD_03648 at 3843.386 kb on - strand, within ECD_03648 at 3843.487 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.528 kb on + strand, within ECD_03648 at 3843.529 kb on - strand, within ECD_03648 at 3843.529 kb on - strand, within ECD_03648 at 3843.529 kb on - strand, within ECD_03648 at 3843.529 kb on - strand, within ECD_03648 at 3843.529 kb on - strand, within ECD_03648 at 3843.536 kb on - strand, within ECD_03648 at 3843.636 kb on + strand at 3843.646 kb on + strand at 3843.647 kb on - strand at 3843.653 kb on + strand at 3843.690 kb on + strand at 3843.690 kb on + strand at 3843.691 kb on - strand at 3843.714 kb on + strand at 3843.714 kb on + strand at 3843.714 kb on + strand at 3843.714 kb on + strand at 3843.715 kb on - strand at 3843.715 kb on - strand at 3843.715 kb on - strand at 3843.715 kb on - strand at 3843.719 kb on + strand at 3843.719 kb on + strand at 3843.719 kb on + strand at 3843.725 kb on + strand at 3843.725 kb on + strand at 3843.726 kb on - strand at 3843.726 kb on - strand at 3843.726 kb on - strand at 3843.729 kb on + strand at 3843.758 kb on + strand at 3843.759 kb on - strand at 3843.993 kb on + strand, within ECD_03649 at 3843.994 kb on - strand, within ECD_03649 at 3843.994 kb on - strand, within ECD_03649 at 3843.994 kb on - strand, within ECD_03649 at 3844.035 kb on + strand, within ECD_03649 at 3844.036 kb on - strand, within ECD_03649 at 3844.036 kb on - strand, within ECD_03649 at 3844.036 kb on - strand, within ECD_03649 at 3844.037 kb on + strand, within ECD_03649 at 3844.037 kb on + strand, within ECD_03649 at 3844.037 kb on + strand, within ECD_03649 at 3844.037 kb on + strand, within ECD_03649 at 3844.038 kb on - strand, within ECD_03649 at 3844.038 kb on - strand, within ECD_03649 at 3844.038 kb on - strand, within ECD_03649 at 3844.038 kb on - strand, within ECD_03649 at 3844.038 kb on - strand, within ECD_03649 at 3844.073 kb on + strand, within ECD_03649 at 3844.127 kb on - strand, within ECD_03649 at 3844.130 kb on + strand, within ECD_03649 at 3844.131 kb on - strand, within ECD_03649 at 3844.403 kb on + strand, within ECD_03649 at 3844.419 kb on - strand, within ECD_03649 at 3844.458 kb on + strand, within ECD_03649 at 3844.459 kb on - strand, within ECD_03649 at 3844.459 kb on - strand, within ECD_03649 at 3844.556 kb on + strand, within ECD_03649 at 3844.556 kb on + strand, within ECD_03649 at 3844.564 kb on + strand, within ECD_03649 at 3844.564 kb on + strand, within ECD_03649 at 3844.565 kb on - strand, within ECD_03649 at 3844.626 kb on - strand, within ECD_03649 at 3844.655 kb on + strand, within ECD_03649 at 3844.680 kb on + strand, within ECD_03649 at 3844.680 kb on + strand, within ECD_03649 at 3844.681 kb on - strand, within ECD_03649 at 3844.681 kb on - strand, within ECD_03649 at 3844.681 kb on - strand, within ECD_03649 at 3844.775 kb on - strand, within ECD_03649 at 3844.775 kb on - strand, within ECD_03649 at 3844.775 kb on - strand, within ECD_03649 at 3844.809 kb on + strand, within ECD_03649 at 3844.810 kb on - strand, within ECD_03649 at 3844.810 kb on - strand, within ECD_03649 at 3844.817 kb on + strand, within ECD_03649 at 3844.965 kb on + strand, within ECD_03649 at 3844.966 kb on - strand, within ECD_03649 at 3844.966 kb on - strand, within ECD_03649 at 3844.966 kb on - strand, within ECD_03649 at 3844.995 kb on + strand, within ECD_03649 at 3844.996 kb on - strand, within ECD_03649 at 3845.000 kb on + strand, within ECD_03649 at 3845.000 kb on + strand, within ECD_03649 at 3845.001 kb on - strand, within ECD_03649 at 3845.001 kb on - strand, within ECD_03649 at 3845.146 kb on + strand, within ECD_03649 at 3845.146 kb on + strand, within ECD_03649 at 3845.158 kb on - strand, within ECD_03649 at 3845.357 kb on + strand, within ECD_03649 at 3845.358 kb on - strand, within ECD_03649 at 3845.358 kb on - strand, within ECD_03649 at 3845.384 kb on + strand, within ECD_03649 at 3845.392 kb on + strand at 3845.398 kb on + strand at 3845.398 kb on + strand at 3845.399 kb on - strand at 3845.618 kb on + strand at 3845.618 kb on + strand at 3845.619 kb on - strand at 3845.622 kb on + strand at 3845.622 kb on + strand at 3845.623 kb on - strand at 3845.649 kb on - strand at 3845.772 kb on - strand, within ECD_03650 at 3846.276 kb on + strand, within ECD_03650 at 3846.303 kb on + strand, within ECD_03650 at 3846.334 kb on - strand, within ECD_03650 at 3846.344 kb on + strand, within ECD_03650 at 3846.403 kb on - strand, within ECD_03650 at 3846.468 kb on - strand, within ECD_03650 at 3846.508 kb on + strand, within ECD_03650 at 3846.508 kb on + strand, within ECD_03650
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 3,842,720 - -5.3 3,842,721 + +0.6 3,842,747 + -1.4 3,842,852 + ECD_03648 0.14 -3.7 3,842,896 + ECD_03648 0.18 -4.3 3,842,897 - ECD_03648 0.18 -6.3 3,842,897 - ECD_03648 0.18 -5.0 3,842,897 - ECD_03648 0.18 -3.7 3,842,927 + ECD_03648 0.22 -3.3 3,843,011 + ECD_03648 0.31 -2.4 3,843,011 + ECD_03648 0.31 -3.2 3,843,011 + ECD_03648 0.31 -2.0 3,843,011 + ECD_03648 0.31 -4.0 3,843,012 - ECD_03648 0.31 -4.1 3,843,012 - ECD_03648 0.31 -1.0 3,843,054 + ECD_03648 0.35 -3.5 3,843,113 + ECD_03648 0.42 -1.6 3,843,113 + ECD_03648 0.42 -0.5 3,843,114 - ECD_03648 0.42 -2.3 3,843,114 - ECD_03648 0.42 -3.9 3,843,214 + ECD_03648 0.52 -1.2 3,843,214 + ECD_03648 0.52 -3.0 3,843,214 + ECD_03648 0.52 -3.8 3,843,214 + ECD_03648 0.52 -2.8 3,843,215 - ECD_03648 0.53 -3.9 3,843,218 + ECD_03648 0.53 -2.2 3,843,218 + ECD_03648 0.53 -4.1 3,843,218 + ECD_03648 0.53 -1.6 3,843,218 + ECD_03648 0.53 -2.2 3,843,218 + ECD_03648 0.53 -2.6 3,843,218 + ECD_03648 0.53 -3.9 3,843,219 - ECD_03648 0.53 -4.8 3,843,219 - ECD_03648 0.53 -5.1 3,843,296 + ECD_03648 0.61 -2.5 3,843,296 + ECD_03648 0.61 -4.2 3,843,297 - ECD_03648 0.61 -5.3 3,843,298 + ECD_03648 0.62 -3.5 3,843,298 + ECD_03648 0.62 -2.0 3,843,299 - ECD_03648 0.62 -5.3 3,843,299 - ECD_03648 0.62 -3.2 3,843,299 - ECD_03648 0.62 -3.3 3,843,385 + ECD_03648 0.71 +1.6 3,843,386 - ECD_03648 0.71 -5.5 3,843,487 + ECD_03648 0.82 -2.7 3,843,528 + ECD_03648 0.86 -1.3 3,843,528 + ECD_03648 0.86 -4.1 3,843,528 + ECD_03648 0.86 -2.3 3,843,528 + ECD_03648 0.86 -3.0 3,843,528 + ECD_03648 0.86 -2.3 3,843,528 + ECD_03648 0.86 -2.9 3,843,528 + ECD_03648 0.86 -3.1 3,843,529 - ECD_03648 0.86 -2.9 3,843,529 - ECD_03648 0.86 -3.2 3,843,529 - ECD_03648 0.86 -3.7 3,843,529 - ECD_03648 0.86 -3.7 3,843,529 - ECD_03648 0.86 -3.3 3,843,536 - ECD_03648 0.87 -2.9 3,843,636 + -0.8 3,843,646 + +0.7 3,843,647 - -1.7 3,843,653 + -1.5 3,843,690 + -1.1 3,843,690 + +0.8 3,843,691 - -2.6 3,843,714 + -2.9 3,843,714 + -4.2 3,843,714 + -3.6 3,843,714 + -3.6 3,843,715 - -3.3 3,843,715 - -4.4 3,843,715 - -2.8 3,843,715 - -3.7 3,843,719 + -2.6 3,843,719 + -3.9 3,843,719 + -2.5 3,843,725 + -3.0 3,843,725 + -3.0 3,843,726 - -5.1 3,843,726 - -2.8 3,843,726 - -4.3 3,843,729 + -4.6 3,843,758 + -6.0 3,843,759 - -2.1 3,843,993 + ECD_03649 0.15 -4.3 3,843,994 - ECD_03649 0.15 -4.6 3,843,994 - ECD_03649 0.15 -2.9 3,843,994 - ECD_03649 0.15 -3.9 3,844,035 + ECD_03649 0.17 -2.1 3,844,036 - ECD_03649 0.17 -3.8 3,844,036 - ECD_03649 0.17 -3.6 3,844,036 - ECD_03649 0.17 -5.5 3,844,037 + ECD_03649 0.17 -4.8 3,844,037 + ECD_03649 0.17 -5.2 3,844,037 + ECD_03649 0.17 -6.3 3,844,037 + ECD_03649 0.17 -4.2 3,844,038 - ECD_03649 0.17 -4.2 3,844,038 - ECD_03649 0.17 -4.1 3,844,038 - ECD_03649 0.17 -5.0 3,844,038 - ECD_03649 0.17 -5.5 3,844,038 - ECD_03649 0.17 -3.0 3,844,073 + ECD_03649 0.19 -4.5 3,844,127 - ECD_03649 0.22 +0.7 3,844,130 + ECD_03649 0.22 -4.6 3,844,131 - ECD_03649 0.22 -4.6 3,844,403 + ECD_03649 0.37 -4.6 3,844,419 - ECD_03649 0.38 -4.8 3,844,458 + ECD_03649 0.40 -4.4 3,844,459 - ECD_03649 0.40 -4.2 3,844,459 - ECD_03649 0.40 -4.1 3,844,556 + ECD_03649 0.45 -3.4 3,844,556 + ECD_03649 0.45 -5.5 3,844,564 + ECD_03649 0.46 -6.1 3,844,564 + ECD_03649 0.46 -3.4 3,844,565 - ECD_03649 0.46 -3.6 3,844,626 - ECD_03649 0.49 -4.1 3,844,655 + ECD_03649 0.51 -4.4 3,844,680 + ECD_03649 0.52 -4.9 3,844,680 + ECD_03649 0.52 -4.3 3,844,681 - ECD_03649 0.52 -2.2 3,844,681 - ECD_03649 0.52 -4.9 3,844,681 - ECD_03649 0.52 -4.5 3,844,775 - ECD_03649 0.57 -3.1 3,844,775 - ECD_03649 0.57 -2.4 3,844,775 - ECD_03649 0.57 -2.7 3,844,809 + ECD_03649 0.59 -3.9 3,844,810 - ECD_03649 0.59 -4.5 3,844,810 - ECD_03649 0.59 -6.4 3,844,817 + ECD_03649 0.59 -4.4 3,844,965 + ECD_03649 0.67 -5.7 3,844,966 - ECD_03649 0.67 -1.6 3,844,966 - ECD_03649 0.67 -2.6 3,844,966 - ECD_03649 0.67 -2.5 3,844,995 + ECD_03649 0.69 -1.0 3,844,996 - ECD_03649 0.69 -3.6 3,845,000 + ECD_03649 0.69 -3.8 3,845,000 + ECD_03649 0.69 -4.3 3,845,001 - ECD_03649 0.69 -0.6 3,845,001 - ECD_03649 0.69 -4.2 3,845,146 + ECD_03649 0.77 -4.2 3,845,146 + ECD_03649 0.77 -5.5 3,845,158 - ECD_03649 0.78 -4.0 3,845,357 + ECD_03649 0.88 -2.3 3,845,358 - ECD_03649 0.88 -4.9 3,845,358 - ECD_03649 0.88 -3.8 3,845,384 + ECD_03649 0.90 -2.0 3,845,392 + -3.9 3,845,398 + -4.2 3,845,398 + -3.0 3,845,399 - -5.1 3,845,618 + -2.9 3,845,618 + -1.3 3,845,619 - -3.0 3,845,622 + -1.8 3,845,622 + -3.1 3,845,623 - -2.7 3,845,649 - +0.2 3,845,772 - ECD_03650 0.13 -4.4 3,846,276 + ECD_03650 0.46 -2.2 3,846,303 + ECD_03650 0.47 -4.4 3,846,334 - ECD_03650 0.49 -1.3 3,846,344 + ECD_03650 0.50 -3.4 3,846,403 - ECD_03650 0.54 -2.4 3,846,468 - ECD_03650 0.58 -2.1 3,846,508 + ECD_03650 0.61 -2.7 3,846,508 + ECD_03650 0.61 -2.1
Or see this region's nucleotide sequence