Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03238 and ECD_03239 are separated by 17 nucleotides ECD_03239 and ECD_03240 are separated by 106 nucleotides ECD_03240 and ECD_03241 are separated by 91 nucleotides
ECD_03238: ECD_03238 - D-ribulose-5-phosphate 3-epimerase, at 3,374,760 to 3,375,437
_03238
ECD_03239: ECD_03239 - DNA adenine methyltransferase, at 3,375,455 to 3,376,291
_03239
ECD_03240: ECD_03240 - cell division protein that binds to the septal ring, at 3,376,398 to 3,377,684
_03240
ECD_03241: ECD_03241 - 3-dehydroquinate synthase, at 3,377,776 to 3,378,864
_03241
Position (kb)
3376
3377
3378 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3375.428 kb on - strand at 3376.303 kb on - strand at 3376.390 kb on - strand at 3376.390 kb on - strand at 3376.390 kb on - strand at 3376.400 kb on - strand at 3376.417 kb on - strand at 3376.417 kb on - strand at 3376.473 kb on - strand at 3376.473 kb on - strand at 3376.473 kb on - strand at 3376.473 kb on - strand at 3376.508 kb on - strand at 3376.508 kb on - strand at 3376.529 kb on - strand, within ECD_03240 at 3376.529 kb on - strand, within ECD_03240 at 3376.529 kb on - strand, within ECD_03240 at 3376.529 kb on - strand, within ECD_03240 at 3376.529 kb on - strand, within ECD_03240 at 3376.529 kb on - strand, within ECD_03240 at 3376.529 kb on - strand, within ECD_03240 at 3376.617 kb on - strand, within ECD_03240 at 3376.643 kb on - strand, within ECD_03240 at 3376.643 kb on - strand, within ECD_03240 at 3376.643 kb on - strand, within ECD_03240 at 3377.022 kb on - strand, within ECD_03240 at 3377.022 kb on - strand, within ECD_03240 at 3377.022 kb on - strand, within ECD_03240 at 3377.151 kb on - strand, within ECD_03240 at 3377.151 kb on - strand, within ECD_03240 at 3377.262 kb on - strand, within ECD_03240 at 3377.347 kb on - strand, within ECD_03240 at 3377.347 kb on - strand, within ECD_03240 at 3377.347 kb on - strand, within ECD_03240 at 3377.347 kb on - strand, within ECD_03240 at 3377.376 kb on - strand, within ECD_03240 at 3377.376 kb on - strand, within ECD_03240 at 3377.376 kb on - strand, within ECD_03240 at 3377.378 kb on - strand, within ECD_03240 at 3377.378 kb on - strand, within ECD_03240 at 3377.378 kb on - strand, within ECD_03240 at 3377.556 kb on - strand at 3377.687 kb on - strand at 3377.753 kb on - strand at 3377.778 kb on - strand at 3377.778 kb on - strand at 3377.778 kb on - strand at 3377.870 kb on - strand at 3377.870 kb on - strand at 3377.876 kb on - strand at 3377.876 kb on - strand at 3377.918 kb on - strand, within ECD_03241 at 3377.918 kb on - strand, within ECD_03241 at 3377.922 kb on - strand, within ECD_03241 at 3377.984 kb on - strand, within ECD_03241 at 3377.986 kb on - strand, within ECD_03241 at 3377.986 kb on - strand, within ECD_03241 at 3377.986 kb on - strand, within ECD_03241 at 3377.989 kb on - strand, within ECD_03241 at 3378.077 kb on - strand, within ECD_03241 at 3378.077 kb on - strand, within ECD_03241 at 3378.211 kb on - strand, within ECD_03241 at 3378.211 kb on - strand, within ECD_03241 at 3378.294 kb on + strand, within ECD_03241 at 3378.393 kb on - strand, within ECD_03241 at 3378.472 kb on + strand, within ECD_03241 at 3378.548 kb on - strand, within ECD_03241 at 3378.573 kb on + strand, within ECD_03241 at 3378.574 kb on - strand, within ECD_03241 at 3378.639 kb on + strand, within ECD_03241
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 3,375,428 - -0.1 3,376,303 - -0.2 3,376,390 - -0.6 3,376,390 - -0.1 3,376,390 - +0.1 3,376,400 - -0.5 3,376,417 - -0.5 3,376,417 - -0.1 3,376,473 - -1.6 3,376,473 - +0.7 3,376,473 - -1.0 3,376,473 - -0.7 3,376,508 - -2.4 3,376,508 - -1.7 3,376,529 - ECD_03240 0.10 -1.3 3,376,529 - ECD_03240 0.10 -0.7 3,376,529 - ECD_03240 0.10 -0.7 3,376,529 - ECD_03240 0.10 -1.3 3,376,529 - ECD_03240 0.10 +1.2 3,376,529 - ECD_03240 0.10 -0.8 3,376,529 - ECD_03240 0.10 -0.3 3,376,617 - ECD_03240 0.17 -0.5 3,376,643 - ECD_03240 0.19 -1.4 3,376,643 - ECD_03240 0.19 -2.1 3,376,643 - ECD_03240 0.19 -1.0 3,377,022 - ECD_03240 0.48 -1.2 3,377,022 - ECD_03240 0.48 -0.3 3,377,022 - ECD_03240 0.48 -1.2 3,377,151 - ECD_03240 0.59 -0.3 3,377,151 - ECD_03240 0.59 -1.0 3,377,262 - ECD_03240 0.67 -1.0 3,377,347 - ECD_03240 0.74 -0.0 3,377,347 - ECD_03240 0.74 -0.8 3,377,347 - ECD_03240 0.74 -0.6 3,377,347 - ECD_03240 0.74 -0.8 3,377,376 - ECD_03240 0.76 -1.6 3,377,376 - ECD_03240 0.76 -0.3 3,377,376 - ECD_03240 0.76 -1.0 3,377,378 - ECD_03240 0.76 -1.1 3,377,378 - ECD_03240 0.76 -0.4 3,377,378 - ECD_03240 0.76 -0.9 3,377,556 - -0.9 3,377,687 - -1.4 3,377,753 - -0.8 3,377,778 - +0.2 3,377,778 - -0.7 3,377,778 - +0.7 3,377,870 - -1.7 3,377,870 - -2.2 3,377,876 - -3.4 3,377,876 - -1.5 3,377,918 - ECD_03241 0.13 -3.2 3,377,918 - ECD_03241 0.13 -3.5 3,377,922 - ECD_03241 0.13 -4.6 3,377,984 - ECD_03241 0.19 -1.2 3,377,986 - ECD_03241 0.19 -2.0 3,377,986 - ECD_03241 0.19 -1.0 3,377,986 - ECD_03241 0.19 -3.3 3,377,989 - ECD_03241 0.20 -5.1 3,378,077 - ECD_03241 0.28 -1.8 3,378,077 - ECD_03241 0.28 -0.8 3,378,211 - ECD_03241 0.40 -3.0 3,378,211 - ECD_03241 0.40 -1.3 3,378,294 + ECD_03241 0.48 -1.5 3,378,393 - ECD_03241 0.57 -0.4 3,378,472 + ECD_03241 0.64 -3.0 3,378,548 - ECD_03241 0.71 -3.6 3,378,573 + ECD_03241 0.73 -2.9 3,378,574 - ECD_03241 0.73 -0.4 3,378,639 + ECD_03241 0.79 -2.2
Or see this region's nucleotide sequence