Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02664 and ECD_t00051 are separated by 208 nucleotides ECD_t00051 and ECD_t00052 are separated by 33 nucleotides ECD_t00052 and ECD_t00053 are separated by 33 nucleotides ECD_t00053 and ECD_02665 are separated by 73 nucleotides ECD_02665 and ECD_02666 are separated by 231 nucleotides
ECD_02664: ECD_02664 - membrane-bound lytic murein transglycosylase A, at 2,784,361 to 2,785,458
_02664
ECD_t00051: ECD_t00051 - tRNA-Met, at 2,785,667 to 2,785,743
_t00051
ECD_t00052: ECD_t00052 - tRNA-Met, at 2,785,777 to 2,785,853
_t00052
ECD_t00053: ECD_t00053 - tRNA-Met, at 2,785,887 to 2,785,963
_t00053
ECD_02665: ECD_02665 - N-acetylmuramoyl-L-alanine amidase, at 2,786,037 to 2,787,290
_02665
ECD_02666: ECD_02666 - amino acid N-acetyltransferase and inactive acetylglutamate kinase, at 2,787,522 to 2,788,853
_02666
Position (kb)
2786
2787
2788 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2785.038 kb on - strand, within ECD_02664 at 2785.038 kb on - strand, within ECD_02664 at 2785.041 kb on + strand, within ECD_02664 at 2785.042 kb on - strand, within ECD_02664 at 2785.042 kb on - strand, within ECD_02664 at 2785.042 kb on - strand, within ECD_02664 at 2785.042 kb on - strand, within ECD_02664 at 2785.094 kb on + strand, within ECD_02664 at 2785.094 kb on + strand, within ECD_02664 at 2785.094 kb on + strand, within ECD_02664 at 2785.095 kb on - strand, within ECD_02664 at 2785.095 kb on - strand, within ECD_02664 at 2785.095 kb on - strand, within ECD_02664 at 2785.095 kb on - strand, within ECD_02664 at 2785.105 kb on - strand, within ECD_02664 at 2785.117 kb on - strand, within ECD_02664 at 2785.121 kb on + strand, within ECD_02664 at 2785.122 kb on - strand, within ECD_02664 at 2785.122 kb on - strand, within ECD_02664 at 2785.122 kb on - strand, within ECD_02664 at 2785.171 kb on - strand, within ECD_02664 at 2785.216 kb on - strand, within ECD_02664 at 2785.216 kb on - strand, within ECD_02664 at 2785.217 kb on + strand, within ECD_02664 at 2785.217 kb on + strand, within ECD_02664 at 2785.218 kb on - strand, within ECD_02664 at 2785.218 kb on - strand, within ECD_02664 at 2785.218 kb on - strand, within ECD_02664 at 2785.218 kb on - strand, within ECD_02664 at 2785.224 kb on + strand, within ECD_02664 at 2785.224 kb on + strand, within ECD_02664 at 2785.224 kb on + strand, within ECD_02664 at 2785.258 kb on - strand, within ECD_02664 at 2785.263 kb on + strand, within ECD_02664 at 2785.264 kb on - strand, within ECD_02664 at 2785.264 kb on - strand, within ECD_02664 at 2785.270 kb on - strand, within ECD_02664 at 2785.362 kb on + strand at 2785.362 kb on + strand at 2785.363 kb on - strand at 2785.364 kb on + strand at 2785.364 kb on + strand at 2785.365 kb on - strand at 2785.365 kb on - strand at 2785.428 kb on + strand at 2785.436 kb on + strand at 2785.436 kb on + strand at 2785.437 kb on - strand at 2785.437 kb on - strand at 2785.437 kb on - strand at 2785.437 kb on - strand at 2785.437 kb on - strand at 2785.437 kb on - strand at 2785.477 kb on - strand at 2785.499 kb on + strand at 2785.648 kb on + strand at 2785.648 kb on + strand at 2785.650 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.761 kb on + strand at 2785.769 kb on + strand at 2785.769 kb on + strand at 2785.769 kb on + strand at 2785.769 kb on + strand at 2785.769 kb on + strand at 2785.870 kb on + strand at 2785.870 kb on + strand at 2785.870 kb on + strand at 2785.966 kb on + strand at 2786.009 kb on + strand at 2786.010 kb on - strand at 2786.035 kb on + strand at 2786.035 kb on + strand at 2786.082 kb on - strand at 2786.082 kb on - strand at 2786.082 kb on - strand at 2786.139 kb on - strand at 2786.156 kb on + strand at 2786.193 kb on - strand, within ECD_02665 at 2786.206 kb on - strand, within ECD_02665 at 2786.268 kb on - strand, within ECD_02665 at 2786.319 kb on + strand, within ECD_02665 at 2786.320 kb on - strand, within ECD_02665 at 2786.320 kb on - strand, within ECD_02665 at 2786.411 kb on - strand, within ECD_02665 at 2786.411 kb on - strand, within ECD_02665 at 2786.484 kb on - strand, within ECD_02665 at 2786.484 kb on - strand, within ECD_02665 at 2786.587 kb on + strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.588 kb on - strand, within ECD_02665 at 2786.598 kb on - strand, within ECD_02665 at 2786.598 kb on - strand, within ECD_02665 at 2786.598 kb on - strand, within ECD_02665 at 2786.637 kb on + strand, within ECD_02665 at 2786.637 kb on + strand, within ECD_02665 at 2786.638 kb on - strand, within ECD_02665 at 2786.638 kb on - strand, within ECD_02665 at 2786.672 kb on - strand, within ECD_02665 at 2786.720 kb on + strand, within ECD_02665 at 2786.721 kb on - strand, within ECD_02665 at 2786.721 kb on - strand, within ECD_02665 at 2786.721 kb on - strand, within ECD_02665 at 2786.721 kb on - strand, within ECD_02665 at 2786.809 kb on + strand, within ECD_02665 at 2786.809 kb on + strand, within ECD_02665 at 2786.810 kb on - strand, within ECD_02665 at 2786.889 kb on - strand, within ECD_02665 at 2786.941 kb on - strand, within ECD_02665 at 2786.958 kb on + strand, within ECD_02665 at 2787.058 kb on - strand, within ECD_02665 at 2787.058 kb on - strand, within ECD_02665 at 2787.092 kb on + strand, within ECD_02665 at 2787.093 kb on - strand, within ECD_02665 at 2787.111 kb on - strand, within ECD_02665 at 2787.111 kb on - strand, within ECD_02665 at 2787.111 kb on - strand, within ECD_02665 at 2787.111 kb on - strand, within ECD_02665 at 2787.112 kb on + strand, within ECD_02665 at 2787.112 kb on + strand, within ECD_02665 at 2787.112 kb on + strand, within ECD_02665 at 2787.113 kb on - strand, within ECD_02665 at 2787.151 kb on + strand, within ECD_02665 at 2787.152 kb on - strand, within ECD_02665 at 2787.152 kb on - strand, within ECD_02665 at 2787.217 kb on - strand at 2787.217 kb on - strand at 2787.315 kb on - strand at 2787.315 kb on - strand at 2787.323 kb on + strand at 2787.324 kb on - strand at 2787.324 kb on - strand at 2787.331 kb on - strand at 2787.331 kb on - strand at 2787.383 kb on - strand at 2787.405 kb on + strand at 2787.405 kb on + strand at 2787.420 kb on - strand at 2787.536 kb on + strand at 2787.537 kb on - strand at 2787.576 kb on + strand at 2787.576 kb on + strand at 2787.576 kb on + strand at 2787.576 kb on + strand at 2787.577 kb on - strand at 2787.578 kb on + strand at 2787.578 kb on + strand at 2787.578 kb on + strand at 2787.653 kb on + strand at 2787.653 kb on + strand at 2787.703 kb on + strand, within ECD_02666 at 2787.703 kb on + strand, within ECD_02666 at 2787.703 kb on + strand, within ECD_02666 at 2787.708 kb on + strand, within ECD_02666 at 2787.708 kb on + strand, within ECD_02666 at 2787.765 kb on + strand, within ECD_02666 at 2787.765 kb on + strand, within ECD_02666 at 2787.766 kb on - strand, within ECD_02666 at 2787.777 kb on - strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.778 kb on + strand, within ECD_02666 at 2787.779 kb on - strand, within ECD_02666 at 2787.842 kb on + strand, within ECD_02666 at 2787.843 kb on - strand, within ECD_02666 at 2787.843 kb on - strand, within ECD_02666 at 2787.845 kb on + strand, within ECD_02666 at 2787.846 kb on - strand, within ECD_02666 at 2787.896 kb on + strand, within ECD_02666 at 2787.897 kb on - strand, within ECD_02666 at 2787.897 kb on - strand, within ECD_02666 at 2787.924 kb on - strand, within ECD_02666 at 2787.960 kb on + strand, within ECD_02666 at 2788.030 kb on + strand, within ECD_02666 at 2788.031 kb on - strand, within ECD_02666 at 2788.166 kb on + strand, within ECD_02666 at 2788.166 kb on + strand, within ECD_02666 at 2788.167 kb on - strand, within ECD_02666 at 2788.181 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666 at 2788.248 kb on + strand, within ECD_02666
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,785,038 - ECD_02664 0.62 -0.7 2,785,038 - ECD_02664 0.62 +0.5 2,785,041 + ECD_02664 0.62 -1.1 2,785,042 - ECD_02664 0.62 -0.2 2,785,042 - ECD_02664 0.62 +0.7 2,785,042 - ECD_02664 0.62 -1.7 2,785,042 - ECD_02664 0.62 +0.2 2,785,094 + ECD_02664 0.67 -1.4 2,785,094 + ECD_02664 0.67 -0.2 2,785,094 + ECD_02664 0.67 +0.9 2,785,095 - ECD_02664 0.67 -0.9 2,785,095 - ECD_02664 0.67 +0.9 2,785,095 - ECD_02664 0.67 -0.2 2,785,095 - ECD_02664 0.67 +0.8 2,785,105 - ECD_02664 0.68 -0.8 2,785,117 - ECD_02664 0.69 -0.2 2,785,121 + ECD_02664 0.69 +1.3 2,785,122 - ECD_02664 0.69 +0.7 2,785,122 - ECD_02664 0.69 +0.4 2,785,122 - ECD_02664 0.69 -0.1 2,785,171 - ECD_02664 0.74 -2.0 2,785,216 - ECD_02664 0.78 -0.2 2,785,216 - ECD_02664 0.78 -0.5 2,785,217 + ECD_02664 0.78 -0.6 2,785,217 + ECD_02664 0.78 -0.1 2,785,218 - ECD_02664 0.78 -0.7 2,785,218 - ECD_02664 0.78 +0.8 2,785,218 - ECD_02664 0.78 -0.8 2,785,218 - ECD_02664 0.78 -0.1 2,785,224 + ECD_02664 0.79 +0.8 2,785,224 + ECD_02664 0.79 -0.1 2,785,224 + ECD_02664 0.79 +0.8 2,785,258 - ECD_02664 0.82 -0.4 2,785,263 + ECD_02664 0.82 -0.3 2,785,264 - ECD_02664 0.82 +0.0 2,785,264 - ECD_02664 0.82 -0.5 2,785,270 - ECD_02664 0.83 +1.0 2,785,362 + +0.7 2,785,362 + +0.0 2,785,363 - +1.8 2,785,364 + -1.0 2,785,364 + +0.3 2,785,365 - +1.6 2,785,365 - -0.2 2,785,428 + -0.6 2,785,436 + +0.2 2,785,436 + -0.3 2,785,437 - +0.1 2,785,437 - +0.1 2,785,437 - -0.4 2,785,437 - +0.1 2,785,437 - -0.7 2,785,437 - -1.0 2,785,477 - -0.1 2,785,499 + -1.0 2,785,648 + -1.0 2,785,648 + -0.5 2,785,650 + -2.0 2,785,761 + +0.6 2,785,761 + +0.6 2,785,761 + -0.5 2,785,761 + +0.3 2,785,761 + +0.2 2,785,761 + +0.2 2,785,761 + -0.8 2,785,761 + -3.0 2,785,761 + -0.8 2,785,761 + -0.6 2,785,769 + -0.2 2,785,769 + -2.1 2,785,769 + +0.2 2,785,769 + -0.3 2,785,769 + +0.8 2,785,870 + +0.1 2,785,870 + +0.3 2,785,870 + +0.4 2,785,966 + +0.4 2,786,009 + +0.4 2,786,010 - +0.1 2,786,035 + -0.2 2,786,035 + +0.0 2,786,082 - +1.7 2,786,082 - +0.8 2,786,082 - +1.2 2,786,139 - +0.7 2,786,156 + +1.0 2,786,193 - ECD_02665 0.12 +1.3 2,786,206 - ECD_02665 0.13 +1.6 2,786,268 - ECD_02665 0.18 +1.7 2,786,319 + ECD_02665 0.22 +1.4 2,786,320 - ECD_02665 0.23 +0.2 2,786,320 - ECD_02665 0.23 +1.6 2,786,411 - ECD_02665 0.30 -2.1 2,786,411 - ECD_02665 0.30 +1.2 2,786,484 - ECD_02665 0.36 +1.4 2,786,484 - ECD_02665 0.36 +0.7 2,786,587 + ECD_02665 0.44 +0.8 2,786,588 - ECD_02665 0.44 +0.4 2,786,588 - ECD_02665 0.44 +0.9 2,786,588 - ECD_02665 0.44 +0.9 2,786,588 - ECD_02665 0.44 +0.6 2,786,588 - ECD_02665 0.44 +0.8 2,786,588 - ECD_02665 0.44 -0.1 2,786,588 - ECD_02665 0.44 +2.5 2,786,588 - ECD_02665 0.44 +1.8 2,786,588 - ECD_02665 0.44 +0.8 2,786,588 - ECD_02665 0.44 -0.6 2,786,598 - ECD_02665 0.45 +0.8 2,786,598 - ECD_02665 0.45 +0.6 2,786,598 - ECD_02665 0.45 +0.9 2,786,637 + ECD_02665 0.48 +1.2 2,786,637 + ECD_02665 0.48 +0.4 2,786,638 - ECD_02665 0.48 +0.9 2,786,638 - ECD_02665 0.48 +0.1 2,786,672 - ECD_02665 0.51 -0.7 2,786,720 + ECD_02665 0.54 +2.0 2,786,721 - ECD_02665 0.55 -1.1 2,786,721 - ECD_02665 0.55 +0.8 2,786,721 - ECD_02665 0.55 -0.2 2,786,721 - ECD_02665 0.55 +0.2 2,786,809 + ECD_02665 0.62 +2.1 2,786,809 + ECD_02665 0.62 -1.3 2,786,810 - ECD_02665 0.62 +1.3 2,786,889 - ECD_02665 0.68 +0.3 2,786,941 - ECD_02665 0.72 +2.0 2,786,958 + ECD_02665 0.73 +1.5 2,787,058 - ECD_02665 0.81 -0.2 2,787,058 - ECD_02665 0.81 +0.3 2,787,092 + ECD_02665 0.84 -0.1 2,787,093 - ECD_02665 0.84 +0.5 2,787,111 - ECD_02665 0.86 +0.6 2,787,111 - ECD_02665 0.86 +0.5 2,787,111 - ECD_02665 0.86 +1.1 2,787,111 - ECD_02665 0.86 -0.1 2,787,112 + ECD_02665 0.86 +2.0 2,787,112 + ECD_02665 0.86 +0.2 2,787,112 + ECD_02665 0.86 +1.0 2,787,113 - ECD_02665 0.86 +0.8 2,787,151 + ECD_02665 0.89 +1.9 2,787,152 - ECD_02665 0.89 +0.8 2,787,152 - ECD_02665 0.89 +0.0 2,787,217 - +0.2 2,787,217 - +0.1 2,787,315 - +0.0 2,787,315 - -1.7 2,787,323 + +1.6 2,787,324 - -2.0 2,787,324 - -0.3 2,787,331 - -0.2 2,787,331 - -0.8 2,787,383 - -1.2 2,787,405 + +0.3 2,787,405 + -1.2 2,787,420 - -1.1 2,787,536 + -3.7 2,787,537 - -1.0 2,787,576 + -4.9 2,787,576 + -1.7 2,787,576 + -1.8 2,787,576 + -2.1 2,787,577 - -3.0 2,787,578 + -2.4 2,787,578 + -1.7 2,787,578 + -2.9 2,787,653 + -2.4 2,787,653 + -4.1 2,787,703 + ECD_02666 0.14 -4.1 2,787,703 + ECD_02666 0.14 +0.2 2,787,703 + ECD_02666 0.14 -1.6 2,787,708 + ECD_02666 0.14 -3.1 2,787,708 + ECD_02666 0.14 -0.2 2,787,765 + ECD_02666 0.18 -1.5 2,787,765 + ECD_02666 0.18 -3.5 2,787,766 - ECD_02666 0.18 -2.6 2,787,777 - ECD_02666 0.19 -1.2 2,787,778 + ECD_02666 0.19 -1.3 2,787,778 + ECD_02666 0.19 -3.1 2,787,778 + ECD_02666 0.19 -2.4 2,787,778 + ECD_02666 0.19 -2.2 2,787,778 + ECD_02666 0.19 -1.6 2,787,778 + ECD_02666 0.19 -2.8 2,787,778 + ECD_02666 0.19 -1.3 2,787,778 + ECD_02666 0.19 -3.0 2,787,778 + ECD_02666 0.19 -4.1 2,787,778 + ECD_02666 0.19 -1.8 2,787,778 + ECD_02666 0.19 -1.0 2,787,779 - ECD_02666 0.19 -0.2 2,787,842 + ECD_02666 0.24 -1.7 2,787,843 - ECD_02666 0.24 -0.9 2,787,843 - ECD_02666 0.24 -0.2 2,787,845 + ECD_02666 0.24 -3.1 2,787,846 - ECD_02666 0.24 -1.7 2,787,896 + ECD_02666 0.28 -1.4 2,787,897 - ECD_02666 0.28 -0.5 2,787,897 - ECD_02666 0.28 -1.6 2,787,924 - ECD_02666 0.30 -3.5 2,787,960 + ECD_02666 0.33 -1.7 2,788,030 + ECD_02666 0.38 -3.1 2,788,031 - ECD_02666 0.38 -0.2 2,788,166 + ECD_02666 0.48 -1.5 2,788,166 + ECD_02666 0.48 -0.9 2,788,167 - ECD_02666 0.48 -3.3 2,788,181 + ECD_02666 0.49 -1.3 2,788,248 + ECD_02666 0.55 -2.3 2,788,248 + ECD_02666 0.55 -2.2 2,788,248 + ECD_02666 0.55 -2.4 2,788,248 + ECD_02666 0.55 -2.9 2,788,248 + ECD_02666 0.55 -2.2 2,788,248 + ECD_02666 0.55 -0.8
Or see this region's nucleotide sequence