Strain Fitness in Escherichia coli BL21 around ECD_02665

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02664 and ECD_t00051 are separated by 208 nucleotidesECD_t00051 and ECD_t00052 are separated by 33 nucleotidesECD_t00052 and ECD_t00053 are separated by 33 nucleotidesECD_t00053 and ECD_02665 are separated by 73 nucleotidesECD_02665 and ECD_02666 are separated by 231 nucleotides ECD_02664: ECD_02664 - membrane-bound lytic murein transglycosylase A, at 2,784,361 to 2,785,458 _02664 ECD_t00051: ECD_t00051 - tRNA-Met, at 2,785,667 to 2,785,743 _t00051 ECD_t00052: ECD_t00052 - tRNA-Met, at 2,785,777 to 2,785,853 _t00052 ECD_t00053: ECD_t00053 - tRNA-Met, at 2,785,887 to 2,785,963 _t00053 ECD_02665: ECD_02665 - N-acetylmuramoyl-L-alanine amidase, at 2,786,037 to 2,787,290 _02665 ECD_02666: ECD_02666 - amino acid N-acetyltransferase and inactive acetylglutamate kinase, at 2,787,522 to 2,788,853 _02666 Position (kb) 2786 2787 2788Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 2785.038 kb on - strand, within ECD_02664at 2785.038 kb on - strand, within ECD_02664at 2785.041 kb on + strand, within ECD_02664at 2785.042 kb on - strand, within ECD_02664at 2785.042 kb on - strand, within ECD_02664at 2785.042 kb on - strand, within ECD_02664at 2785.042 kb on - strand, within ECD_02664at 2785.094 kb on + strand, within ECD_02664at 2785.094 kb on + strand, within ECD_02664at 2785.094 kb on + strand, within ECD_02664at 2785.095 kb on - strand, within ECD_02664at 2785.095 kb on - strand, within ECD_02664at 2785.095 kb on - strand, within ECD_02664at 2785.095 kb on - strand, within ECD_02664at 2785.105 kb on - strand, within ECD_02664at 2785.117 kb on - strand, within ECD_02664at 2785.121 kb on + strand, within ECD_02664at 2785.122 kb on - strand, within ECD_02664at 2785.122 kb on - strand, within ECD_02664at 2785.122 kb on - strand, within ECD_02664at 2785.171 kb on - strand, within ECD_02664at 2785.216 kb on - strand, within ECD_02664at 2785.216 kb on - strand, within ECD_02664at 2785.217 kb on + strand, within ECD_02664at 2785.217 kb on + strand, within ECD_02664at 2785.218 kb on - strand, within ECD_02664at 2785.218 kb on - strand, within ECD_02664at 2785.218 kb on - strand, within ECD_02664at 2785.218 kb on - strand, within ECD_02664at 2785.224 kb on + strand, within ECD_02664at 2785.224 kb on + strand, within ECD_02664at 2785.224 kb on + strand, within ECD_02664at 2785.258 kb on - strand, within ECD_02664at 2785.263 kb on + strand, within ECD_02664at 2785.264 kb on - strand, within ECD_02664at 2785.264 kb on - strand, within ECD_02664at 2785.270 kb on - strand, within ECD_02664at 2785.362 kb on + strandat 2785.362 kb on + strandat 2785.363 kb on - strandat 2785.364 kb on + strandat 2785.364 kb on + strandat 2785.365 kb on - strandat 2785.365 kb on - strandat 2785.428 kb on + strandat 2785.436 kb on + strandat 2785.436 kb on + strandat 2785.437 kb on - strandat 2785.437 kb on - strandat 2785.437 kb on - strandat 2785.437 kb on - strandat 2785.437 kb on - strandat 2785.437 kb on - strandat 2785.477 kb on - strandat 2785.499 kb on + strandat 2785.648 kb on + strandat 2785.648 kb on + strandat 2785.650 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.761 kb on + strandat 2785.769 kb on + strandat 2785.769 kb on + strandat 2785.769 kb on + strandat 2785.769 kb on + strandat 2785.769 kb on + strandat 2785.870 kb on + strandat 2785.870 kb on + strandat 2785.870 kb on + strandat 2785.966 kb on + strandat 2786.009 kb on + strandat 2786.010 kb on - strandat 2786.035 kb on + strandat 2786.035 kb on + strandat 2786.082 kb on - strandat 2786.082 kb on - strandat 2786.082 kb on - strandat 2786.139 kb on - strandat 2786.156 kb on + strandat 2786.193 kb on - strand, within ECD_02665at 2786.206 kb on - strand, within ECD_02665at 2786.268 kb on - strand, within ECD_02665at 2786.319 kb on + strand, within ECD_02665at 2786.320 kb on - strand, within ECD_02665at 2786.320 kb on - strand, within ECD_02665at 2786.411 kb on - strand, within ECD_02665at 2786.411 kb on - strand, within ECD_02665at 2786.484 kb on - strand, within ECD_02665at 2786.484 kb on - strand, within ECD_02665at 2786.587 kb on + strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.588 kb on - strand, within ECD_02665at 2786.598 kb on - strand, within ECD_02665at 2786.598 kb on - strand, within ECD_02665at 2786.598 kb on - strand, within ECD_02665at 2786.637 kb on + strand, within ECD_02665at 2786.637 kb on + strand, within ECD_02665at 2786.638 kb on - strand, within ECD_02665at 2786.638 kb on - strand, within ECD_02665at 2786.672 kb on - strand, within ECD_02665at 2786.720 kb on + strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.721 kb on - strand, within ECD_02665at 2786.809 kb on + strand, within ECD_02665at 2786.809 kb on + strand, within ECD_02665at 2786.810 kb on - strand, within ECD_02665at 2786.889 kb on - strand, within ECD_02665at 2786.941 kb on - strand, within ECD_02665at 2786.958 kb on + strand, within ECD_02665at 2787.058 kb on - strand, within ECD_02665at 2787.058 kb on - strand, within ECD_02665at 2787.092 kb on + strand, within ECD_02665at 2787.093 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.111 kb on - strand, within ECD_02665at 2787.112 kb on + strand, within ECD_02665at 2787.112 kb on + strand, within ECD_02665at 2787.112 kb on + strand, within ECD_02665at 2787.113 kb on - strand, within ECD_02665at 2787.151 kb on + strand, within ECD_02665at 2787.152 kb on - strand, within ECD_02665at 2787.152 kb on - strand, within ECD_02665at 2787.217 kb on - strandat 2787.217 kb on - strandat 2787.315 kb on - strandat 2787.315 kb on - strandat 2787.323 kb on + strandat 2787.324 kb on - strandat 2787.324 kb on - strandat 2787.331 kb on - strandat 2787.331 kb on - strandat 2787.383 kb on - strandat 2787.405 kb on + strandat 2787.405 kb on + strandat 2787.420 kb on - strandat 2787.536 kb on + strandat 2787.537 kb on - strandat 2787.576 kb on + strandat 2787.576 kb on + strandat 2787.576 kb on + strandat 2787.576 kb on + strandat 2787.577 kb on - strandat 2787.578 kb on + strandat 2787.578 kb on + strandat 2787.578 kb on + strandat 2787.653 kb on + strandat 2787.653 kb on + strandat 2787.703 kb on + strand, within ECD_02666at 2787.703 kb on + strand, within ECD_02666at 2787.703 kb on + strand, within ECD_02666at 2787.708 kb on + strand, within ECD_02666at 2787.708 kb on + strand, within ECD_02666at 2787.765 kb on + strand, within ECD_02666at 2787.765 kb on + strand, within ECD_02666at 2787.766 kb on - strand, within ECD_02666at 2787.777 kb on - strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.778 kb on + strand, within ECD_02666at 2787.779 kb on - strand, within ECD_02666at 2787.842 kb on + strand, within ECD_02666at 2787.843 kb on - strand, within ECD_02666at 2787.843 kb on - strand, within ECD_02666at 2787.845 kb on + strand, within ECD_02666at 2787.846 kb on - strand, within ECD_02666at 2787.896 kb on + strand, within ECD_02666at 2787.897 kb on - strand, within ECD_02666at 2787.897 kb on - strand, within ECD_02666at 2787.924 kb on - strand, within ECD_02666at 2787.960 kb on + strand, within ECD_02666at 2788.030 kb on + strand, within ECD_02666at 2788.031 kb on - strand, within ECD_02666at 2788.166 kb on + strand, within ECD_02666at 2788.166 kb on + strand, within ECD_02666at 2788.167 kb on - strand, within ECD_02666at 2788.181 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666at 2788.248 kb on + strand, within ECD_02666

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,785,038 - ECD_02664 0.62 -0.7
2,785,038 - ECD_02664 0.62 +0.5
2,785,041 + ECD_02664 0.62 -1.1
2,785,042 - ECD_02664 0.62 -0.2
2,785,042 - ECD_02664 0.62 +0.7
2,785,042 - ECD_02664 0.62 -1.7
2,785,042 - ECD_02664 0.62 +0.2
2,785,094 + ECD_02664 0.67 -1.4
2,785,094 + ECD_02664 0.67 -0.2
2,785,094 + ECD_02664 0.67 +0.9
2,785,095 - ECD_02664 0.67 -0.9
2,785,095 - ECD_02664 0.67 +0.9
2,785,095 - ECD_02664 0.67 -0.2
2,785,095 - ECD_02664 0.67 +0.8
2,785,105 - ECD_02664 0.68 -0.8
2,785,117 - ECD_02664 0.69 -0.2
2,785,121 + ECD_02664 0.69 +1.3
2,785,122 - ECD_02664 0.69 +0.7
2,785,122 - ECD_02664 0.69 +0.4
2,785,122 - ECD_02664 0.69 -0.1
2,785,171 - ECD_02664 0.74 -2.0
2,785,216 - ECD_02664 0.78 -0.2
2,785,216 - ECD_02664 0.78 -0.5
2,785,217 + ECD_02664 0.78 -0.6
2,785,217 + ECD_02664 0.78 -0.1
2,785,218 - ECD_02664 0.78 -0.7
2,785,218 - ECD_02664 0.78 +0.8
2,785,218 - ECD_02664 0.78 -0.8
2,785,218 - ECD_02664 0.78 -0.1
2,785,224 + ECD_02664 0.79 +0.8
2,785,224 + ECD_02664 0.79 -0.1
2,785,224 + ECD_02664 0.79 +0.8
2,785,258 - ECD_02664 0.82 -0.4
2,785,263 + ECD_02664 0.82 -0.3
2,785,264 - ECD_02664 0.82 +0.0
2,785,264 - ECD_02664 0.82 -0.5
2,785,270 - ECD_02664 0.83 +1.0
2,785,362 + +0.7
2,785,362 + +0.0
2,785,363 - +1.8
2,785,364 + -1.0
2,785,364 + +0.3
2,785,365 - +1.6
2,785,365 - -0.2
2,785,428 + -0.6
2,785,436 + +0.2
2,785,436 + -0.3
2,785,437 - +0.1
2,785,437 - +0.1
2,785,437 - -0.4
2,785,437 - +0.1
2,785,437 - -0.7
2,785,437 - -1.0
2,785,477 - -0.1
2,785,499 + -1.0
2,785,648 + -1.0
2,785,648 + -0.5
2,785,650 + -2.0
2,785,761 + +0.6
2,785,761 + +0.6
2,785,761 + -0.5
2,785,761 + +0.3
2,785,761 + +0.2
2,785,761 + +0.2
2,785,761 + -0.8
2,785,761 + -3.0
2,785,761 + -0.8
2,785,761 + -0.6
2,785,769 + -0.2
2,785,769 + -2.1
2,785,769 + +0.2
2,785,769 + -0.3
2,785,769 + +0.8
2,785,870 + +0.1
2,785,870 + +0.3
2,785,870 + +0.4
2,785,966 + +0.4
2,786,009 + +0.4
2,786,010 - +0.1
2,786,035 + -0.2
2,786,035 + +0.0
2,786,082 - +1.7
2,786,082 - +0.8
2,786,082 - +1.2
2,786,139 - +0.7
2,786,156 + +1.0
2,786,193 - ECD_02665 0.12 +1.3
2,786,206 - ECD_02665 0.13 +1.6
2,786,268 - ECD_02665 0.18 +1.7
2,786,319 + ECD_02665 0.22 +1.4
2,786,320 - ECD_02665 0.23 +0.2
2,786,320 - ECD_02665 0.23 +1.6
2,786,411 - ECD_02665 0.30 -2.1
2,786,411 - ECD_02665 0.30 +1.2
2,786,484 - ECD_02665 0.36 +1.4
2,786,484 - ECD_02665 0.36 +0.7
2,786,587 + ECD_02665 0.44 +0.8
2,786,588 - ECD_02665 0.44 +0.4
2,786,588 - ECD_02665 0.44 +0.9
2,786,588 - ECD_02665 0.44 +0.9
2,786,588 - ECD_02665 0.44 +0.6
2,786,588 - ECD_02665 0.44 +0.8
2,786,588 - ECD_02665 0.44 -0.1
2,786,588 - ECD_02665 0.44 +2.5
2,786,588 - ECD_02665 0.44 +1.8
2,786,588 - ECD_02665 0.44 +0.8
2,786,588 - ECD_02665 0.44 -0.6
2,786,598 - ECD_02665 0.45 +0.8
2,786,598 - ECD_02665 0.45 +0.6
2,786,598 - ECD_02665 0.45 +0.9
2,786,637 + ECD_02665 0.48 +1.2
2,786,637 + ECD_02665 0.48 +0.4
2,786,638 - ECD_02665 0.48 +0.9
2,786,638 - ECD_02665 0.48 +0.1
2,786,672 - ECD_02665 0.51 -0.7
2,786,720 + ECD_02665 0.54 +2.0
2,786,721 - ECD_02665 0.55 -1.1
2,786,721 - ECD_02665 0.55 +0.8
2,786,721 - ECD_02665 0.55 -0.2
2,786,721 - ECD_02665 0.55 +0.2
2,786,809 + ECD_02665 0.62 +2.1
2,786,809 + ECD_02665 0.62 -1.3
2,786,810 - ECD_02665 0.62 +1.3
2,786,889 - ECD_02665 0.68 +0.3
2,786,941 - ECD_02665 0.72 +2.0
2,786,958 + ECD_02665 0.73 +1.5
2,787,058 - ECD_02665 0.81 -0.2
2,787,058 - ECD_02665 0.81 +0.3
2,787,092 + ECD_02665 0.84 -0.1
2,787,093 - ECD_02665 0.84 +0.5
2,787,111 - ECD_02665 0.86 +0.6
2,787,111 - ECD_02665 0.86 +0.5
2,787,111 - ECD_02665 0.86 +1.1
2,787,111 - ECD_02665 0.86 -0.1
2,787,112 + ECD_02665 0.86 +2.0
2,787,112 + ECD_02665 0.86 +0.2
2,787,112 + ECD_02665 0.86 +1.0
2,787,113 - ECD_02665 0.86 +0.8
2,787,151 + ECD_02665 0.89 +1.9
2,787,152 - ECD_02665 0.89 +0.8
2,787,152 - ECD_02665 0.89 +0.0
2,787,217 - +0.2
2,787,217 - +0.1
2,787,315 - +0.0
2,787,315 - -1.7
2,787,323 + +1.6
2,787,324 - -2.0
2,787,324 - -0.3
2,787,331 - -0.2
2,787,331 - -0.8
2,787,383 - -1.2
2,787,405 + +0.3
2,787,405 + -1.2
2,787,420 - -1.1
2,787,536 + -3.7
2,787,537 - -1.0
2,787,576 + -4.9
2,787,576 + -1.7
2,787,576 + -1.8
2,787,576 + -2.1
2,787,577 - -3.0
2,787,578 + -2.4
2,787,578 + -1.7
2,787,578 + -2.9
2,787,653 + -2.4
2,787,653 + -4.1
2,787,703 + ECD_02666 0.14 -4.1
2,787,703 + ECD_02666 0.14 +0.2
2,787,703 + ECD_02666 0.14 -1.6
2,787,708 + ECD_02666 0.14 -3.1
2,787,708 + ECD_02666 0.14 -0.2
2,787,765 + ECD_02666 0.18 -1.5
2,787,765 + ECD_02666 0.18 -3.5
2,787,766 - ECD_02666 0.18 -2.6
2,787,777 - ECD_02666 0.19 -1.2
2,787,778 + ECD_02666 0.19 -1.3
2,787,778 + ECD_02666 0.19 -3.1
2,787,778 + ECD_02666 0.19 -2.4
2,787,778 + ECD_02666 0.19 -2.2
2,787,778 + ECD_02666 0.19 -1.6
2,787,778 + ECD_02666 0.19 -2.8
2,787,778 + ECD_02666 0.19 -1.3
2,787,778 + ECD_02666 0.19 -3.0
2,787,778 + ECD_02666 0.19 -4.1
2,787,778 + ECD_02666 0.19 -1.8
2,787,778 + ECD_02666 0.19 -1.0
2,787,779 - ECD_02666 0.19 -0.2
2,787,842 + ECD_02666 0.24 -1.7
2,787,843 - ECD_02666 0.24 -0.9
2,787,843 - ECD_02666 0.24 -0.2
2,787,845 + ECD_02666 0.24 -3.1
2,787,846 - ECD_02666 0.24 -1.7
2,787,896 + ECD_02666 0.28 -1.4
2,787,897 - ECD_02666 0.28 -0.5
2,787,897 - ECD_02666 0.28 -1.6
2,787,924 - ECD_02666 0.30 -3.5
2,787,960 + ECD_02666 0.33 -1.7
2,788,030 + ECD_02666 0.38 -3.1
2,788,031 - ECD_02666 0.38 -0.2
2,788,166 + ECD_02666 0.48 -1.5
2,788,166 + ECD_02666 0.48 -0.9
2,788,167 - ECD_02666 0.48 -3.3
2,788,181 + ECD_02666 0.49 -1.3
2,788,248 + ECD_02666 0.55 -2.3
2,788,248 + ECD_02666 0.55 -2.2
2,788,248 + ECD_02666 0.55 -2.4
2,788,248 + ECD_02666 0.55 -2.9
2,788,248 + ECD_02666 0.55 -2.2
2,788,248 + ECD_02666 0.55 -0.8

Or see this region's nucleotide sequence