Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00472 and ECD_00473 overlap by 4 nucleotides ECD_00473 and ECD_00474 are separated by 117 nucleotides ECD_00474 and ECD_00475 are separated by 2 nucleotides
ECD_00472: ECD_00472 - N5-carboxyaminoimidazole ribonucleotide synthase, at 520,614 to 521,681
_00472
ECD_00473: ECD_00473 - N5-carboxyaminoimidazole ribonucleotide mutase, at 521,678 to 522,187
_00473
ECD_00474: ECD_00474 - UDP-2,3-diacylglucosamine pyrophosphohydrolase, at 522,305 to 523,027
_00474
ECD_00475: ECD_00475 - peptidyl-prolyl cis-trans isomerase B (rotamase B), at 523,030 to 523,524
_00475
Position (kb)
521
522
523 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 520.743 kb on - strand, within ECD_00472 at 520.807 kb on + strand, within ECD_00472 at 520.821 kb on - strand, within ECD_00472 at 520.851 kb on - strand, within ECD_00472 at 520.949 kb on + strand, within ECD_00472 at 521.120 kb on + strand, within ECD_00472 at 521.121 kb on - strand, within ECD_00472 at 521.213 kb on + strand, within ECD_00472 at 521.214 kb on - strand, within ECD_00472 at 521.214 kb on - strand, within ECD_00472 at 521.232 kb on - strand, within ECD_00472 at 521.232 kb on - strand, within ECD_00472 at 521.385 kb on + strand, within ECD_00472 at 521.385 kb on + strand, within ECD_00472 at 521.454 kb on - strand, within ECD_00472 at 521.640 kb on - strand at 521.865 kb on - strand, within ECD_00473 at 521.874 kb on + strand, within ECD_00473 at 521.875 kb on - strand, within ECD_00473 at 521.990 kb on - strand, within ECD_00473 at 522.041 kb on - strand, within ECD_00473
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 520,743 - ECD_00472 0.12 -0.2 520,807 + ECD_00472 0.18 -3.1 520,821 - ECD_00472 0.19 -0.8 520,851 - ECD_00472 0.22 -1.6 520,949 + ECD_00472 0.31 -3.4 521,120 + ECD_00472 0.47 -2.9 521,121 - ECD_00472 0.47 -3.8 521,213 + ECD_00472 0.56 -2.3 521,214 - ECD_00472 0.56 -2.1 521,214 - ECD_00472 0.56 -2.4 521,232 - ECD_00472 0.58 +0.5 521,232 - ECD_00472 0.58 -1.0 521,385 + ECD_00472 0.72 -3.3 521,385 + ECD_00472 0.72 -4.7 521,454 - ECD_00472 0.79 -3.2 521,640 - -2.0 521,865 - ECD_00473 0.37 -2.7 521,874 + ECD_00473 0.38 -4.3 521,875 - ECD_00473 0.39 -2.3 521,990 - ECD_00473 0.61 -2.4 522,041 - ECD_00473 0.71 -6.1
Or see this region's nucleotide sequence