Experiment: L-Rhamnose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02512 and ECD_02513 are separated by 398 nucleotides ECD_02513 and ECD_02514 overlap by 82 nucleotides ECD_02514 and ECD_02515 are separated by 305 nucleotides
ECD_02512: ECD_02512 - hypothetical protein, at 2,626,475 to 2,627,371
_02512
ECD_02513: ECD_02513 - IS1 protein InsA, at 2,627,770 to 2,628,045
_02513
ECD_02514: ECD_02514 - IS1 protein InsB, at 2,627,964 to 2,628,467
_02514
ECD_02515: ECD_02515 - carbon starvation protein, at 2,628,773 to 2,629,750
_02515
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2627.381 kb on + strand at 2627.408 kb on + strand at 2627.544 kb on + strand at 2627.745 kb on - strand at 2628.610 kb on + strand at 2628.619 kb on - strand at 2628.668 kb on - strand at 2628.720 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.747 kb on + strand at 2628.748 kb on - strand at 2628.748 kb on - strand at 2628.748 kb on - strand at 2628.748 kb on - strand at 2628.748 kb on - strand at 2628.748 kb on - strand at 2628.748 kb on - strand at 2628.756 kb on + strand at 2628.756 kb on + strand at 2628.756 kb on + strand at 2628.756 kb on + strand at 2628.757 kb on - strand at 2628.757 kb on - strand at 2628.757 kb on - strand at 2628.793 kb on - strand at 2628.799 kb on + strand at 2628.825 kb on - strand at 2628.825 kb on - strand at 2629.217 kb on + strand, within ECD_02515 at 2629.217 kb on + strand, within ECD_02515 at 2629.218 kb on - strand, within ECD_02515 at 2629.248 kb on + strand, within ECD_02515 at 2629.248 kb on + strand, within ECD_02515 at 2629.265 kb on + strand, within ECD_02515 at 2629.265 kb on + strand, within ECD_02515 at 2629.265 kb on + strand, within ECD_02515 at 2629.265 kb on + strand, within ECD_02515 at 2629.265 kb on + strand, within ECD_02515 at 2629.265 kb on + strand, within ECD_02515 at 2629.266 kb on - strand, within ECD_02515 at 2629.266 kb on - strand, within ECD_02515 at 2629.266 kb on - strand, within ECD_02515 at 2629.266 kb on - strand, within ECD_02515 at 2629.286 kb on + strand, within ECD_02515 at 2629.286 kb on + strand, within ECD_02515 at 2629.286 kb on + strand, within ECD_02515 at 2629.287 kb on - strand, within ECD_02515 at 2629.376 kb on + strand, within ECD_02515 at 2629.376 kb on + strand, within ECD_02515 at 2629.376 kb on + strand, within ECD_02515 at 2629.376 kb on + strand, within ECD_02515 at 2629.376 kb on + strand, within ECD_02515
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose remove 2,627,381 + -0.0 2,627,408 + -0.1 2,627,544 + -0.2 2,627,745 - +0.2 2,628,610 + -0.1 2,628,619 - +0.0 2,628,668 - +0.1 2,628,720 + +0.3 2,628,747 + +0.7 2,628,747 + +1.7 2,628,747 + +1.4 2,628,747 + +0.6 2,628,747 + +2.1 2,628,747 + +0.0 2,628,747 + -0.4 2,628,747 + -0.9 2,628,747 + +0.3 2,628,747 + +0.3 2,628,747 + +0.8 2,628,747 + -2.3 2,628,747 + +1.7 2,628,747 + -0.2 2,628,747 + +0.8 2,628,747 + +0.2 2,628,748 - +1.2 2,628,748 - +0.6 2,628,748 - -1.1 2,628,748 - -1.6 2,628,748 - +0.0 2,628,748 - +0.1 2,628,748 - -0.3 2,628,756 + +0.9 2,628,756 + +0.5 2,628,756 + +0.4 2,628,756 + +1.3 2,628,757 - +0.2 2,628,757 - +0.1 2,628,757 - -0.6 2,628,793 - -0.7 2,628,799 + +0.8 2,628,825 - -3.4 2,628,825 - +0.1 2,629,217 + ECD_02515 0.45 -0.7 2,629,217 + ECD_02515 0.45 -0.7 2,629,218 - ECD_02515 0.46 +2.4 2,629,248 + ECD_02515 0.49 +0.7 2,629,248 + ECD_02515 0.49 +0.2 2,629,265 + ECD_02515 0.50 +0.1 2,629,265 + ECD_02515 0.50 -0.6 2,629,265 + ECD_02515 0.50 -1.8 2,629,265 + ECD_02515 0.50 +0.2 2,629,265 + ECD_02515 0.50 -0.6 2,629,265 + ECD_02515 0.50 -0.0 2,629,266 - ECD_02515 0.50 -0.8 2,629,266 - ECD_02515 0.50 +0.7 2,629,266 - ECD_02515 0.50 -0.6 2,629,266 - ECD_02515 0.50 +0.2 2,629,286 + ECD_02515 0.52 +1.1 2,629,286 + ECD_02515 0.52 -1.0 2,629,286 + ECD_02515 0.52 -0.7 2,629,287 - ECD_02515 0.53 +1.1 2,629,376 + ECD_02515 0.62 -0.3 2,629,376 + ECD_02515 0.62 -1.1 2,629,376 + ECD_02515 0.62 -0.9 2,629,376 + ECD_02515 0.62 +0.5 2,629,376 + ECD_02515 0.62 +0.1
Or see this region's nucleotide sequence