Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04232 and ECD_04233 are separated by 48 nucleotides
ECD_04232: ECD_04232 - methyl-accepting chemotaxis protein I, serine sensor receptor, at 4,510,033 to 4,511,688
_04232
ECD_04233: ECD_04233 - putative L-galactonate:H+ symporter, at 4,511,737 to 4,513,098
_04233
Position (kb)
4511
4512
4513
4514 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4510.806 kb on + strand, within ECD_04232 at 4510.864 kb on + strand, within ECD_04232 at 4510.864 kb on + strand, within ECD_04232 at 4510.864 kb on + strand, within ECD_04232 at 4510.864 kb on + strand, within ECD_04232 at 4510.864 kb on + strand, within ECD_04232 at 4510.864 kb on + strand, within ECD_04232 at 4511.122 kb on - strand, within ECD_04232 at 4511.125 kb on - strand, within ECD_04232 at 4511.284 kb on - strand, within ECD_04232 at 4511.398 kb on - strand, within ECD_04232 at 4511.687 kb on - strand at 4511.730 kb on - strand at 4511.784 kb on - strand at 4511.784 kb on - strand at 4511.784 kb on - strand at 4511.859 kb on + strand at 4511.859 kb on + strand at 4511.860 kb on - strand at 4512.056 kb on - strand, within ECD_04233 at 4512.056 kb on - strand, within ECD_04233 at 4512.056 kb on - strand, within ECD_04233 at 4512.105 kb on + strand, within ECD_04233 at 4512.155 kb on + strand, within ECD_04233 at 4512.235 kb on - strand, within ECD_04233 at 4512.236 kb on + strand, within ECD_04233 at 4512.236 kb on + strand, within ECD_04233 at 4512.287 kb on + strand, within ECD_04233 at 4512.288 kb on - strand, within ECD_04233 at 4512.391 kb on - strand, within ECD_04233 at 4512.405 kb on - strand, within ECD_04233 at 4512.431 kb on - strand, within ECD_04233 at 4512.431 kb on - strand, within ECD_04233 at 4512.431 kb on - strand, within ECD_04233 at 4512.456 kb on + strand, within ECD_04233 at 4512.456 kb on + strand, within ECD_04233 at 4512.456 kb on + strand, within ECD_04233 at 4512.456 kb on + strand, within ECD_04233 at 4512.457 kb on - strand, within ECD_04233 at 4512.457 kb on - strand, within ECD_04233 at 4512.457 kb on - strand, within ECD_04233 at 4512.457 kb on - strand, within ECD_04233 at 4512.458 kb on + strand, within ECD_04233 at 4512.458 kb on + strand, within ECD_04233 at 4512.458 kb on + strand, within ECD_04233 at 4512.458 kb on + strand, within ECD_04233 at 4512.459 kb on - strand, within ECD_04233 at 4512.459 kb on - strand, within ECD_04233 at 4512.488 kb on - strand, within ECD_04233 at 4512.499 kb on - strand, within ECD_04233 at 4512.501 kb on + strand, within ECD_04233 at 4512.501 kb on + strand, within ECD_04233 at 4512.502 kb on - strand, within ECD_04233 at 4512.502 kb on - strand, within ECD_04233 at 4512.573 kb on + strand, within ECD_04233 at 4512.574 kb on - strand, within ECD_04233 at 4512.709 kb on - strand, within ECD_04233 at 4513.441 kb on + strand at 4513.853 kb on + strand at 4513.987 kb on - strand at 4513.989 kb on + strand at 4514.033 kb on + strand at 4514.033 kb on + strand at 4514.034 kb on - strand at 4514.034 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 4,510,806 + ECD_04232 0.47 +0.6 4,510,864 + ECD_04232 0.50 -3.7 4,510,864 + ECD_04232 0.50 +0.2 4,510,864 + ECD_04232 0.50 -0.3 4,510,864 + ECD_04232 0.50 +0.6 4,510,864 + ECD_04232 0.50 -1.0 4,510,864 + ECD_04232 0.50 +0.1 4,511,122 - ECD_04232 0.66 -0.7 4,511,125 - ECD_04232 0.66 -1.0 4,511,284 - ECD_04232 0.76 +0.3 4,511,398 - ECD_04232 0.82 +0.1 4,511,687 - -0.6 4,511,730 - -0.5 4,511,784 - +0.5 4,511,784 - +0.5 4,511,784 - +0.1 4,511,859 + +0.6 4,511,859 + +0.2 4,511,860 - +0.8 4,512,056 - ECD_04233 0.23 -0.2 4,512,056 - ECD_04233 0.23 -0.9 4,512,056 - ECD_04233 0.23 -0.3 4,512,105 + ECD_04233 0.27 +1.6 4,512,155 + ECD_04233 0.31 -0.4 4,512,235 - ECD_04233 0.37 -0.5 4,512,236 + ECD_04233 0.37 -1.8 4,512,236 + ECD_04233 0.37 +0.1 4,512,287 + ECD_04233 0.40 +0.6 4,512,288 - ECD_04233 0.40 -0.5 4,512,391 - ECD_04233 0.48 +0.1 4,512,405 - ECD_04233 0.49 -0.1 4,512,431 - ECD_04233 0.51 +0.1 4,512,431 - ECD_04233 0.51 -0.9 4,512,431 - ECD_04233 0.51 +0.0 4,512,456 + ECD_04233 0.53 -0.2 4,512,456 + ECD_04233 0.53 -0.0 4,512,456 + ECD_04233 0.53 +0.5 4,512,456 + ECD_04233 0.53 -0.1 4,512,457 - ECD_04233 0.53 +0.9 4,512,457 - ECD_04233 0.53 +2.4 4,512,457 - ECD_04233 0.53 +1.4 4,512,457 - ECD_04233 0.53 -0.8 4,512,458 + ECD_04233 0.53 -0.1 4,512,458 + ECD_04233 0.53 +0.1 4,512,458 + ECD_04233 0.53 +1.0 4,512,458 + ECD_04233 0.53 +0.9 4,512,459 - ECD_04233 0.53 +0.5 4,512,459 - ECD_04233 0.53 -0.3 4,512,488 - ECD_04233 0.55 +0.2 4,512,499 - ECD_04233 0.56 -0.5 4,512,501 + ECD_04233 0.56 -0.3 4,512,501 + ECD_04233 0.56 +0.7 4,512,502 - ECD_04233 0.56 -0.4 4,512,502 - ECD_04233 0.56 -0.4 4,512,573 + ECD_04233 0.61 +0.3 4,512,574 - ECD_04233 0.61 -1.3 4,512,709 - ECD_04233 0.71 +0.0 4,513,441 + +0.3 4,513,853 + +0.6 4,513,987 - +0.1 4,513,989 + +0.6 4,514,033 + +0.5 4,514,033 + -0.0 4,514,034 - +1.2 4,514,034 - +0.5
Or see this region's nucleotide sequence