Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03820 and ECD_03821 are separated by 202 nucleotides ECD_03821 and ECD_03822 are separated by 54 nucleotides ECD_03822 and ECD_03823 are separated by 6 nucleotides ECD_03823 and ECD_03824 are separated by 183 nucleotides
ECD_03820: ECD_03820 - Primosome factor n, at 4,032,535 to 4,034,733
_03820
ECD_03821: ECD_03821 - 50S ribosomal subunit protein L31, at 4,034,936 to 4,035,148
_03821
ECD_03822: ECD_03822 - putative outer membrane lipoprotein, at 4,035,203 to 4,035,826
_03822
ECD_03823: ECD_03823 - putative lipid binding hydrolase, DUF830 family protein, at 4,035,833 to 4,036,441
_03823
ECD_03824: ECD_03824 - transcriptional repressor, S-adenosylmethionine-binding, at 4,036,625 to 4,036,942
_03824
Position (kb)
4035
4036 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4034.764 kb on + strand at 4034.765 kb on - strand at 4034.769 kb on + strand at 4034.769 kb on + strand at 4034.769 kb on + strand at 4034.769 kb on + strand at 4034.770 kb on - strand at 4035.218 kb on + strand at 4035.219 kb on - strand at 4035.276 kb on - strand, within ECD_03822 at 4035.295 kb on + strand, within ECD_03822 at 4035.296 kb on - strand, within ECD_03822 at 4035.304 kb on + strand, within ECD_03822 at 4035.308 kb on + strand, within ECD_03822 at 4035.319 kb on - strand, within ECD_03822 at 4035.337 kb on - strand, within ECD_03822 at 4035.354 kb on + strand, within ECD_03822 at 4035.355 kb on - strand, within ECD_03822 at 4035.377 kb on - strand, within ECD_03822 at 4035.416 kb on - strand, within ECD_03822 at 4035.416 kb on - strand, within ECD_03822 at 4035.425 kb on + strand, within ECD_03822 at 4035.426 kb on - strand, within ECD_03822 at 4035.426 kb on - strand, within ECD_03822 at 4035.448 kb on + strand, within ECD_03822 at 4035.448 kb on + strand, within ECD_03822 at 4035.448 kb on + strand, within ECD_03822 at 4035.448 kb on + strand, within ECD_03822 at 4035.448 kb on + strand, within ECD_03822 at 4035.449 kb on - strand, within ECD_03822 at 4035.449 kb on - strand, within ECD_03822 at 4035.463 kb on + strand, within ECD_03822 at 4035.532 kb on + strand, within ECD_03822 at 4035.533 kb on - strand, within ECD_03822 at 4035.586 kb on - strand, within ECD_03822 at 4035.715 kb on + strand, within ECD_03822 at 4035.717 kb on + strand, within ECD_03822 at 4035.718 kb on - strand, within ECD_03822 at 4035.721 kb on + strand, within ECD_03822 at 4035.721 kb on + strand, within ECD_03822 at 4035.721 kb on + strand, within ECD_03822 at 4035.722 kb on - strand, within ECD_03822 at 4035.722 kb on - strand, within ECD_03822 at 4035.722 kb on - strand, within ECD_03822 at 4035.724 kb on + strand, within ECD_03822 at 4035.724 kb on + strand, within ECD_03822 at 4035.724 kb on + strand, within ECD_03822 at 4035.835 kb on - strand at 4035.908 kb on + strand, within ECD_03823 at 4035.955 kb on + strand, within ECD_03823 at 4035.956 kb on - strand, within ECD_03823 at 4036.063 kb on - strand, within ECD_03823 at 4036.098 kb on + strand, within ECD_03823 at 4036.099 kb on - strand, within ECD_03823 at 4036.185 kb on + strand, within ECD_03823 at 4036.185 kb on + strand, within ECD_03823 at 4036.185 kb on + strand, within ECD_03823 at 4036.185 kb on + strand, within ECD_03823 at 4036.185 kb on + strand, within ECD_03823 at 4036.185 kb on + strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.186 kb on - strand, within ECD_03823 at 4036.231 kb on - strand, within ECD_03823 at 4036.277 kb on + strand, within ECD_03823 at 4036.277 kb on + strand, within ECD_03823 at 4036.277 kb on + strand, within ECD_03823 at 4036.301 kb on - strand, within ECD_03823 at 4036.301 kb on - strand, within ECD_03823 at 4036.333 kb on + strand, within ECD_03823 at 4036.333 kb on + strand, within ECD_03823 at 4036.400 kb on + strand at 4036.441 kb on + strand at 4036.441 kb on + strand at 4036.442 kb on - strand at 4036.442 kb on - strand at 4036.442 kb on - strand at 4036.445 kb on + strand at 4036.445 kb on + strand at 4036.446 kb on - strand at 4036.457 kb on + strand at 4036.457 kb on + strand at 4036.458 kb on - strand at 4036.458 kb on - strand at 4036.459 kb on + strand at 4036.460 kb on - strand at 4036.569 kb on - strand at 4036.627 kb on - strand at 4036.629 kb on + strand at 4036.629 kb on + strand at 4036.630 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 4,034,764 + +1.1 4,034,765 - +0.2 4,034,769 + +0.1 4,034,769 + -2.4 4,034,769 + +0.6 4,034,769 + -0.1 4,034,770 - -0.6 4,035,218 + -0.5 4,035,219 - +0.2 4,035,276 - ECD_03822 0.12 -1.0 4,035,295 + ECD_03822 0.15 -0.2 4,035,296 - ECD_03822 0.15 +0.2 4,035,304 + ECD_03822 0.16 +0.3 4,035,308 + ECD_03822 0.17 +0.1 4,035,319 - ECD_03822 0.19 -0.3 4,035,337 - ECD_03822 0.21 -0.4 4,035,354 + ECD_03822 0.24 +0.9 4,035,355 - ECD_03822 0.24 -0.2 4,035,377 - ECD_03822 0.28 -0.5 4,035,416 - ECD_03822 0.34 -0.3 4,035,416 - ECD_03822 0.34 +0.0 4,035,425 + ECD_03822 0.36 +1.2 4,035,426 - ECD_03822 0.36 +0.6 4,035,426 - ECD_03822 0.36 +0.9 4,035,448 + ECD_03822 0.39 +0.5 4,035,448 + ECD_03822 0.39 +0.3 4,035,448 + ECD_03822 0.39 +0.8 4,035,448 + ECD_03822 0.39 -0.1 4,035,448 + ECD_03822 0.39 +0.4 4,035,449 - ECD_03822 0.39 +0.4 4,035,449 - ECD_03822 0.39 +0.8 4,035,463 + ECD_03822 0.42 -0.1 4,035,532 + ECD_03822 0.53 +0.6 4,035,533 - ECD_03822 0.53 +0.4 4,035,586 - ECD_03822 0.61 -1.0 4,035,715 + ECD_03822 0.82 -0.6 4,035,717 + ECD_03822 0.82 -0.3 4,035,718 - ECD_03822 0.83 -0.6 4,035,721 + ECD_03822 0.83 +0.5 4,035,721 + ECD_03822 0.83 +1.0 4,035,721 + ECD_03822 0.83 +0.5 4,035,722 - ECD_03822 0.83 +0.8 4,035,722 - ECD_03822 0.83 -0.5 4,035,722 - ECD_03822 0.83 +0.3 4,035,724 + ECD_03822 0.83 +0.5 4,035,724 + ECD_03822 0.83 +2.5 4,035,724 + ECD_03822 0.83 +0.2 4,035,835 - +1.1 4,035,908 + ECD_03823 0.12 +0.6 4,035,955 + ECD_03823 0.20 +0.3 4,035,956 - ECD_03823 0.20 +0.1 4,036,063 - ECD_03823 0.38 +0.4 4,036,098 + ECD_03823 0.44 -0.3 4,036,099 - ECD_03823 0.44 +0.3 4,036,185 + ECD_03823 0.58 -0.2 4,036,185 + ECD_03823 0.58 -0.3 4,036,185 + ECD_03823 0.58 +2.6 4,036,185 + ECD_03823 0.58 +0.2 4,036,185 + ECD_03823 0.58 -0.1 4,036,185 + ECD_03823 0.58 +0.1 4,036,186 - ECD_03823 0.58 +0.4 4,036,186 - ECD_03823 0.58 -0.0 4,036,186 - ECD_03823 0.58 -0.6 4,036,186 - ECD_03823 0.58 +1.2 4,036,186 - ECD_03823 0.58 +1.9 4,036,186 - ECD_03823 0.58 +0.1 4,036,186 - ECD_03823 0.58 -0.6 4,036,231 - ECD_03823 0.65 +0.0 4,036,277 + ECD_03823 0.73 -0.0 4,036,277 + ECD_03823 0.73 -0.9 4,036,277 + ECD_03823 0.73 -0.1 4,036,301 - ECD_03823 0.77 -0.1 4,036,301 - ECD_03823 0.77 -0.1 4,036,333 + ECD_03823 0.82 +0.7 4,036,333 + ECD_03823 0.82 -0.4 4,036,400 + +0.3 4,036,441 + +0.2 4,036,441 + -0.4 4,036,442 - -0.1 4,036,442 - +0.2 4,036,442 - +0.3 4,036,445 + +0.1 4,036,445 + +0.3 4,036,446 - -0.3 4,036,457 + -0.0 4,036,457 + +0.4 4,036,458 - -2.5 4,036,458 - +0.3 4,036,459 + +0.5 4,036,460 - -0.7 4,036,569 - -1.0 4,036,627 - +0.3 4,036,629 + +0.0 4,036,629 + +0.1 4,036,630 - -0.1
Or see this region's nucleotide sequence