Strain Fitness in Escherichia coli BL21 around ECD_00916

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00915 and ECD_00916 are separated by 159 nucleotidesECD_00916 and ECD_00917 are separated by 207 nucleotides ECD_00915: ECD_00915 - 30S ribosomal subunit protein S1, at 967,085 to 968,758 _00915 ECD_00916: ECD_00916 - integration host factor (IHF), DNA-binding protein, beta subunit, at 968,918 to 969,202 _00916 ECD_00917: ECD_00917 - ComEC family inner membrane protein, at 969,410 to 971,674 _00917 Position (kb) 968 969 970Strain fitness (log2 ratio) -1 0 1at 968.802 kb on + strandat 968.863 kb on + strandat 969.143 kb on + strand, within ECD_00916at 969.433 kb on - strandat 969.433 kb on - strandat 969.433 kb on - strandat 969.439 kb on - strandat 969.533 kb on - strandat 969.592 kb on - strandat 969.727 kb on - strand, within ECD_00917

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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968,802 + +0.3
968,863 + +1.1
969,143 + ECD_00916 0.79 -0.3
969,433 - +0.6
969,433 - +0.6
969,433 - -1.0
969,439 - -0.0
969,533 - -1.2
969,592 - -0.5
969,727 - ECD_00917 0.14 -0.1

Or see this region's nucleotide sequence