Strain Fitness in Escherichia coli BL21 around ECD_03410

Experiment: Casamino-acids

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03409 and ECD_03410 are separated by 278 nucleotidesECD_03410 and ECD_03411 are separated by 9 nucleotides ECD_03409: ECD_03409 - IS150 putative transposase, at 3,583,352 to 3,584,203 _03409 ECD_03410: ECD_03410 - glycine tRNA synthetase, beta subunit, at 3,584,482 to 3,586,551 _03410 ECD_03411: ECD_03411 - glycine tRNA synthetase, alpha subunit, at 3,586,561 to 3,587,472 _03411 Position (kb) 3584 3585 3586 3587Strain fitness (log2 ratio) -1 0 1at 3586.567 kb on - strandat 3586.567 kb on - strandat 3587.539 kb on + strandat 3587.540 kb on - strandat 3587.540 kb on - strandat 3587.540 kb on - strandat 3587.545 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino-acids
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3,586,567 - +0.0
3,586,567 - -1.6
3,587,539 + +1.0
3,587,540 - -0.9
3,587,540 - +0.2
3,587,540 - -0.9
3,587,545 - +0.7

Or see this region's nucleotide sequence