Strain Fitness in Escherichia coli BL21 around ECD_01418

Experiment: Casamino-acids

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01416 and ECD_01417 are separated by 43 nucleotidesECD_01417 and ECD_01418 are separated by 239 nucleotidesECD_01418 and ECD_01419 are separated by 32 nucleotidesECD_01419 and ECD_01420 are separated by 3 nucleotides ECD_01416: ECD_01416 - hypothetical protein, at 1,486,678 to 1,487,424 _01416 ECD_01417: ECD_01417 - hypothetical protein, at 1,487,468 to 1,487,668 _01417 ECD_01418: ECD_01418 - H repeat-associated putative transposase, at 1,487,908 to 1,488,699 _01418 ECD_01419: ECD_01419 - 4-oxalocrotonate tautomerase, at 1,488,732 to 1,488,959 _01419 ECD_01420: ECD_01420 - flavin reductase like-protein, at 1,488,963 to 1,489,532 _01420 Position (kb) 1487 1488 1489Strain fitness (log2 ratio) -1 0 1at 1489.673 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino-acids
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1,489,673 + +0.6

Or see this region's nucleotide sequence