Strain Fitness in Escherichia coli BL21 around ECD_01359

Experiment: Casamino-acids

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01358 and ECD_01359 are separated by 290 nucleotidesECD_01359 and ECD_01360 overlap by 4 nucleotidesECD_01360 and ECD_01361 are separated by 17 nucleotides ECD_01358: ECD_01358 - tyramine oxidase, copper-requiring, at 1,424,636 to 1,426,354 _01358 ECD_01359: ECD_01359 - putative transposase-related protein, at 1,426,645 to 1,426,953 _01359 ECD_01360: ECD_01360 - IS3 element protein InsF, at 1,426,950 to 1,427,816 _01360 ECD_01361: ECD_01361 - putative NAD(P)-binding oxidoreductase, at 1,427,834 to 1,428,367 _01361 Position (kb) 1426 1427Strain fitness (log2 ratio) -1 0 1at 1425.655 kb on + strand, within ECD_01358at 1425.781 kb on - strand, within ECD_01358at 1425.911 kb on - strand, within ECD_01358at 1426.157 kb on - strand, within ECD_01358at 1427.831 kb on + strandat 1427.831 kb on + strandat 1427.887 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino-acids
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1,425,655 + ECD_01358 0.59 +0.4
1,425,781 - ECD_01358 0.67 -0.5
1,425,911 - ECD_01358 0.74 -1.1
1,426,157 - ECD_01358 0.88 +0.7
1,427,831 + +0.7
1,427,831 + +0.5
1,427,887 + -0.1

Or see this region's nucleotide sequence