Strain Fitness in Escherichia coli BL21 around ECD_01232

Experiment: Casamino-acids

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01230 and ECD_01231 are separated by 59 nucleotidesECD_01231 and ECD_01232 are separated by 45 nucleotidesECD_01232 and ECD_01233 are separated by 85 nucleotidesECD_01233 and ECD_01234 are separated by 380 nucleotides ECD_01230: ECD_01230 - outer membrane protein W, at 1,299,612 to 1,300,250 _01230 ECD_01231: ECD_01231 - putative rubrerythrin/ferritin-like metal-binding protein, at 1,300,310 to 1,300,816 _01231 ECD_01232: ECD_01232 - putative rubrerythrin/ferritin-like metal-binding protein, at 1,300,862 to 1,301,362 _01232 ECD_01233: ECD_01233 - KGG family protein, at 1,301,448 to 1,301,627 _01233 ECD_01234: ECD_01234 - tryptophan synthase, alpha subunit, at 1,302,008 to 1,302,814 _01234 Position (kb) 1300 1301 1302Strain fitness (log2 ratio) -1 0 1at 1302.082 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Casamino-acids
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1,302,082 + -1.7

Or see this region's nucleotide sequence