Experiment: LB Anaerobic with Norfloxacin 0.00000015625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt guaB and xseA are separated by 161 nucleotides xseA and b2510 overlap by 4 nucleotides b2510 and b2511 are separated by 69 nucleotides
b2508: guaB - inositol-5-monophosphate dehydrogenase (NCBI), at 2,630,626 to 2,632,092
guaB
b2509: xseA - exodeoxyribonuclease VII large subunit (NCBI), at 2,632,254 to 2,633,624
xseA
b2510: b2510 - orf, hypothetical protein (VIMSS), at 2,633,621 to 2,633,836
b2510
b2511: b2511 - putative GTP-binding factor (VIMSS), at 2,633,906 to 2,635,378
b2511
Position (kb)
2632
2633
2634 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2632.102 kb on - strand at 2632.142 kb on - strand at 2632.263 kb on + strand at 2632.263 kb on + strand at 2632.271 kb on - strand at 2632.317 kb on - strand at 2632.419 kb on + strand, within xseA at 2632.419 kb on + strand, within xseA at 2632.555 kb on + strand, within xseA at 2632.578 kb on - strand, within xseA at 2632.658 kb on + strand, within xseA at 2632.658 kb on + strand, within xseA at 2632.670 kb on + strand, within xseA at 2632.670 kb on + strand, within xseA at 2632.688 kb on - strand, within xseA at 2632.688 kb on - strand at 2632.729 kb on + strand, within xseA at 2632.729 kb on + strand, within xseA at 2632.771 kb on - strand, within xseA at 2632.911 kb on + strand, within xseA at 2632.969 kb on + strand, within xseA at 2633.042 kb on - strand, within xseA at 2633.126 kb on + strand, within xseA at 2633.166 kb on - strand, within xseA at 2633.387 kb on + strand, within xseA at 2633.387 kb on + strand, within xseA at 2633.427 kb on - strand, within xseA at 2633.427 kb on - strand, within xseA at 2633.440 kb on + strand, within xseA at 2633.691 kb on + strand, within b2510 at 2633.721 kb on - strand, within b2510 at 2633.787 kb on + strand, within b2510 at 2633.787 kb on + strand, within b2510 at 2633.795 kb on - strand, within b2510 at 2633.805 kb on - strand, within b2510
Per-strain Table
Position Strand Gene LocusTag Fraction LB Anaerobic with Norfloxacin 0.00000015625 mM remove 2,632,102 - +0.9 2,632,142 - +0.4 2,632,263 + -2.5 2,632,263 + -1.9 2,632,271 - -3.0 2,632,317 - -4.1 2,632,419 + xseA b2509 0.12 -3.5 2,632,419 + xseA b2509 0.12 -2.5 2,632,555 + xseA b2509 0.22 -0.1 2,632,578 - xseA b2509 0.24 -1.3 2,632,658 + xseA b2509 0.29 -1.6 2,632,658 + xseA b2509 0.29 -1.6 2,632,670 + xseA b2509 0.30 -2.0 2,632,670 + xseA b2509 0.30 -2.5 2,632,688 - xseA b2509 0.32 -2.1 2,632,688 - -0.9 2,632,729 + xseA b2509 0.35 -1.3 2,632,729 + xseA b2509 0.35 -2.5 2,632,771 - xseA b2509 0.38 -2.1 2,632,911 + xseA b2509 0.48 -1.9 2,632,969 + xseA b2509 0.52 -2.1 2,633,042 - xseA b2509 0.57 -2.4 2,633,126 + xseA b2509 0.64 -2.3 2,633,166 - xseA b2509 0.67 -1.5 2,633,387 + xseA b2509 0.83 -0.9 2,633,387 + xseA b2509 0.83 -0.9 2,633,427 - xseA b2509 0.86 -0.3 2,633,427 - xseA b2509 0.86 -1.3 2,633,440 + xseA b2509 0.87 -2.2 2,633,691 + b2510 b2510 0.32 +1.7 2,633,721 - b2510 b2510 0.46 -0.3 2,633,787 + b2510 b2510 0.77 +1.2 2,633,787 + b2510 b2510 0.77 +0.7 2,633,795 - b2510 b2510 0.81 -0.4 2,633,805 - b2510 b2510 0.85 -0.1
Or see this region's nucleotide sequence