Experiment: 3-aminobenzoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3634 and Atu3635 are separated by 112 nucleotides Atu3635 and Atu8111.1 are separated by 95 nucleotides Atu8111.1 and Atu8111.2 are separated by 237 nucleotides Atu8111.2 and Atu3636 are separated by 324 nucleotides
Atu3634: Atu3634 - penicillin-binding protein dacf precursor, at 686,107 to 687,276
Atu3634
Atu3635: Atu3635 - amidohydrolase, at 687,389 to 688,552
Atu3635
Atu8111.1: Atu8111.1 - tRNA-Arg, at 688,648 to 688,684
Atu8111.1
Atu8111.2: Atu8111.2 - tRNA-Arg, at 688,922 to 688,961
Atu8111.2
Atu3636: Atu3636 - hypothetical protein, at 689,286 to 689,732
Atu3636
Position (kb) 687
688
689 Strain fitness (log2 ratio) -2
-1
0
1 at 686.573 kb on + strand, within Atu3634 at 686.701 kb on + strand, within Atu3634 at 686.719 kb on - strand, within Atu3634 at 686.752 kb on - strand, within Atu3634 at 686.753 kb on - strand, within Atu3634 at 686.785 kb on - strand, within Atu3634 at 686.977 kb on - strand, within Atu3634 at 687.174 kb on + strand at 687.336 kb on - strand at 687.554 kb on - strand, within Atu3635 at 687.574 kb on + strand, within Atu3635 at 687.714 kb on + strand, within Atu3635 at 687.716 kb on + strand, within Atu3635 at 687.724 kb on - strand, within Atu3635 at 687.837 kb on + strand, within Atu3635 at 687.845 kb on - strand, within Atu3635 at 687.873 kb on - strand, within Atu3635 at 687.874 kb on - strand, within Atu3635 at 687.874 kb on - strand, within Atu3635 at 687.970 kb on - strand, within Atu3635 at 687.989 kb on + strand, within Atu3635 at 688.073 kb on - strand, within Atu3635 at 688.085 kb on + strand, within Atu3635 at 688.093 kb on - strand, within Atu3635 at 688.226 kb on + strand, within Atu3635 at 688.227 kb on + strand, within Atu3635 at 688.227 kb on + strand, within Atu3635 at 688.235 kb on - strand, within Atu3635 at 688.273 kb on + strand, within Atu3635 at 688.273 kb on + strand, within Atu3635 at 688.273 kb on + strand, within Atu3635 at 688.281 kb on - strand, within Atu3635 at 688.287 kb on + strand, within Atu3635 at 688.348 kb on + strand, within Atu3635 at 688.348 kb on + strand, within Atu3635 at 688.356 kb on - strand, within Atu3635 at 688.356 kb on - strand, within Atu3635 at 688.356 kb on - strand, within Atu3635 at 688.508 kb on + strand at 688.518 kb on + strand at 688.518 kb on + strand at 688.518 kb on + strand at 688.526 kb on - strand at 688.526 kb on - strand at 688.526 kb on - strand at 689.010 kb on + strand at 689.066 kb on - strand at 689.125 kb on + strand at 689.233 kb on - strand at 689.291 kb on - strand at 689.388 kb on + strand, within Atu3636 at 689.448 kb on + strand, within Atu3636 at 689.458 kb on + strand, within Atu3636
Per-strain Table
Position Strand Gene LocusTag Fraction 3-aminobenzoate (C) remove 686,573 + Atu3634 0.40 -0.0 686,701 + Atu3634 0.51 +1.2 686,719 - Atu3634 0.52 -0.1 686,752 - Atu3634 0.55 +0.0 686,753 - Atu3634 0.55 +0.2 686,785 - Atu3634 0.58 -0.2 686,977 - Atu3634 0.74 +0.2 687,174 + -0.0 687,336 - -0.4 687,554 - Atu3635 0.14 -0.1 687,574 + Atu3635 0.16 +0.9 687,714 + Atu3635 0.28 +0.7 687,716 + Atu3635 0.28 +0.1 687,724 - Atu3635 0.29 +0.3 687,837 + Atu3635 0.38 +0.5 687,845 - Atu3635 0.39 +0.0 687,873 - Atu3635 0.42 +0.5 687,874 - Atu3635 0.42 +0.9 687,874 - Atu3635 0.42 +0.5 687,970 - Atu3635 0.50 +0.4 687,989 + Atu3635 0.52 +0.2 688,073 - Atu3635 0.59 +0.1 688,085 + Atu3635 0.60 -0.1 688,093 - Atu3635 0.60 -0.0 688,226 + Atu3635 0.72 -0.2 688,227 + Atu3635 0.72 +0.0 688,227 + Atu3635 0.72 +0.1 688,235 - Atu3635 0.73 +0.5 688,273 + Atu3635 0.76 +0.3 688,273 + Atu3635 0.76 +0.5 688,273 + Atu3635 0.76 -0.0 688,281 - Atu3635 0.77 +0.3 688,287 + Atu3635 0.77 +0.3 688,348 + Atu3635 0.82 -0.1 688,348 + Atu3635 0.82 +0.5 688,356 - Atu3635 0.83 +0.7 688,356 - Atu3635 0.83 -0.3 688,356 - Atu3635 0.83 +0.3 688,508 + +0.4 688,518 + -0.0 688,518 + -0.2 688,518 + +0.1 688,526 - -0.0 688,526 - +0.3 688,526 - +0.5 689,010 + -0.9 689,066 - +0.3 689,125 + -0.4 689,233 - -1.0 689,291 - -2.2 689,388 + Atu3636 0.23 +0.3 689,448 + Atu3636 0.36 +0.1 689,458 + Atu3636 0.38 -0.2
Or see this region's nucleotide sequence