Experiment: anthranilamide (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu6129 and Atu6130 are separated by 13 nucleotides Atu6130 and Atu6131 are separated by 525 nucleotides Atu6131 and Atu6132 are separated by 158 nucleotides
Atu6129: Atu6129 - conjugal transfer protein, at 147,905 to 149,002
Atu6129
Atu6130: Atu6130 - conserved hypothetical protein, at 149,016 to 149,645
Atu6130
Atu6131: Atu6131 - TraR Antiactivator, at 150,171 to 150,479
Atu6131
Atu6132: Atu6132 - methyl-accepting chemotaxis protein, at 150,638 to 152,377
Atu6132
Position (kb) 149
150 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 148.023 kb on - strand, within Atu6129 at 148.049 kb on - strand, within Atu6129 at 148.101 kb on - strand, within Atu6129 at 148.101 kb on - strand, within Atu6129 at 148.141 kb on + strand, within Atu6129 at 148.141 kb on + strand, within Atu6129 at 148.149 kb on - strand, within Atu6129 at 148.198 kb on - strand, within Atu6129 at 148.223 kb on + strand, within Atu6129 at 148.274 kb on + strand, within Atu6129 at 148.372 kb on + strand, within Atu6129 at 148.380 kb on - strand, within Atu6129 at 148.403 kb on + strand, within Atu6129 at 148.411 kb on - strand, within Atu6129 at 148.420 kb on + strand, within Atu6129 at 148.420 kb on + strand, within Atu6129 at 148.428 kb on - strand, within Atu6129 at 148.458 kb on + strand, within Atu6129 at 148.470 kb on + strand, within Atu6129 at 148.650 kb on - strand, within Atu6129 at 148.655 kb on + strand, within Atu6129 at 148.655 kb on + strand, within Atu6129 at 148.663 kb on - strand, within Atu6129 at 148.678 kb on + strand, within Atu6129 at 148.752 kb on - strand, within Atu6129 at 148.787 kb on + strand, within Atu6129 at 148.819 kb on - strand, within Atu6129 at 148.826 kb on + strand, within Atu6129 at 148.842 kb on + strand, within Atu6129 at 148.842 kb on + strand, within Atu6129 at 148.988 kb on + strand at 148.988 kb on + strand at 149.006 kb on - strand at 149.031 kb on - strand at 149.033 kb on + strand at 149.041 kb on - strand at 149.081 kb on + strand, within Atu6130 at 149.175 kb on - strand, within Atu6130 at 149.183 kb on + strand, within Atu6130 at 149.235 kb on - strand, within Atu6130 at 149.237 kb on + strand, within Atu6130 at 149.273 kb on + strand, within Atu6130 at 149.278 kb on + strand, within Atu6130 at 149.443 kb on + strand, within Atu6130 at 149.453 kb on + strand, within Atu6130 at 149.453 kb on + strand, within Atu6130 at 149.525 kb on + strand, within Atu6130 at 149.555 kb on + strand, within Atu6130 at 149.563 kb on - strand, within Atu6130 at 149.589 kb on - strand at 149.634 kb on + strand at 149.636 kb on + strand at 149.642 kb on - strand at 149.745 kb on - strand at 149.781 kb on + strand at 149.789 kb on - strand at 149.789 kb on - strand at 149.823 kb on + strand at 149.831 kb on - strand at 149.837 kb on - strand at 149.931 kb on + strand at 149.991 kb on + strand at 149.991 kb on + strand at 150.012 kb on + strand at 150.032 kb on + strand at 150.076 kb on - strand at 150.234 kb on - strand, within Atu6131 at 150.348 kb on - strand, within Atu6131 at 150.367 kb on - strand, within Atu6131 at 150.380 kb on + strand, within Atu6131 at 150.388 kb on - strand, within Atu6131 at 150.388 kb on - strand, within Atu6131 at 150.405 kb on - strand, within Atu6131 at 150.535 kb on - strand at 150.535 kb on - strand at 150.540 kb on - strand at 150.551 kb on + strand at 150.551 kb on + strand at 150.559 kb on - strand at 150.559 kb on - strand at 150.599 kb on + strand at 150.599 kb on + strand at 150.635 kb on + strand at 150.635 kb on + strand at 150.643 kb on - strand at 150.645 kb on + strand at 150.645 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction anthranilamide (C) remove 148,023 - Atu6129 0.11 -0.3 148,049 - Atu6129 0.13 -0.4 148,101 - Atu6129 0.18 +0.6 148,101 - Atu6129 0.18 +1.8 148,141 + Atu6129 0.21 -0.1 148,141 + Atu6129 0.21 -0.0 148,149 - Atu6129 0.22 +0.1 148,198 - Atu6129 0.27 -0.1 148,223 + Atu6129 0.29 -0.2 148,274 + Atu6129 0.34 -0.3 148,372 + Atu6129 0.43 +0.0 148,380 - Atu6129 0.43 +0.0 148,403 + Atu6129 0.45 +0.1 148,411 - Atu6129 0.46 +0.5 148,420 + Atu6129 0.47 +0.5 148,420 + Atu6129 0.47 +0.1 148,428 - Atu6129 0.48 +0.5 148,458 + Atu6129 0.50 +2.0 148,470 + Atu6129 0.51 -0.1 148,650 - Atu6129 0.68 -1.0 148,655 + Atu6129 0.68 +0.6 148,655 + Atu6129 0.68 +0.3 148,663 - Atu6129 0.69 +0.4 148,678 + Atu6129 0.70 -1.9 148,752 - Atu6129 0.77 -0.8 148,787 + Atu6129 0.80 +0.3 148,819 - Atu6129 0.83 -0.4 148,826 + Atu6129 0.84 -0.4 148,842 + Atu6129 0.85 -0.3 148,842 + Atu6129 0.85 +0.4 148,988 + -0.6 148,988 + +0.5 149,006 - +0.1 149,031 - -0.0 149,033 + -0.3 149,041 - -1.0 149,081 + Atu6130 0.10 +0.5 149,175 - Atu6130 0.25 -0.2 149,183 + Atu6130 0.27 +0.3 149,235 - Atu6130 0.35 +0.1 149,237 + Atu6130 0.35 +0.7 149,273 + Atu6130 0.41 +0.1 149,278 + Atu6130 0.42 +0.6 149,443 + Atu6130 0.68 +0.5 149,453 + Atu6130 0.69 -0.1 149,453 + Atu6130 0.69 +0.4 149,525 + Atu6130 0.81 +0.4 149,555 + Atu6130 0.86 +0.7 149,563 - Atu6130 0.87 -0.8 149,589 - -0.3 149,634 + +0.7 149,636 + +0.2 149,642 - -0.9 149,745 - +0.1 149,781 + -0.4 149,789 - -0.1 149,789 - -0.2 149,823 + -0.3 149,831 - +0.1 149,837 - +0.5 149,931 + -0.3 149,991 + -0.1 149,991 + +0.1 150,012 + +0.1 150,032 + +1.3 150,076 - -0.5 150,234 - Atu6131 0.20 +0.6 150,348 - Atu6131 0.57 +0.9 150,367 - Atu6131 0.63 +0.1 150,380 + Atu6131 0.68 +0.1 150,388 - Atu6131 0.70 +0.0 150,388 - Atu6131 0.70 +0.7 150,405 - Atu6131 0.76 -0.2 150,535 - +0.6 150,535 - +0.1 150,540 - +0.7 150,551 + +0.0 150,551 + -0.2 150,559 - -0.2 150,559 - +2.8 150,599 + -0.5 150,599 + +0.2 150,635 + +0.3 150,635 + -0.4 150,643 - -0.5 150,645 + +0.2 150,645 + +0.1
Or see this region's nucleotide sequence