Strain Fitness in Escherichia coli BW25113 around b2571

Experiment: LB Anaerobic with Nalidixic 0.00000195313 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Nalidixic 0.00000195313 mM
2,704,865	-	lepA	b2569	0.84	+1.6
2,704,992	+				+1.6
2,705,007	-				-0.7
2,705,209	-				+0.3
2,705,227	-				-0.0
2,705,227	-				-0.1
2,705,249	-				-0.4
2,705,259	-				-0.7
2,705,268	+				+0.1
2,705,500	+	rseC	b2570	0.33	+0.2
2,705,500	+	rseC	b2570	0.33	-0.4
2,705,554	-	rseC	b2570	0.44	+0.7
2,705,594	+	rseC	b2570	0.52	-0.5
2,705,652	+	rseC	b2570	0.64	+0.0
2,705,652	+	rseC	b2570	0.64	-1.2
2,705,662	+	rseC	b2570	0.66	-0.3
2,705,662	+	rseC	b2570	0.66	+0.6
2,705,673	+	rseC	b2570	0.69	-0.3
2,705,699	-	rseC	b2570	0.74	+1.3
2,705,699	-	rseC	b2570	0.74	+0.5
2,705,760	+	rseC	b2570	0.87	+0.1
2,705,761	-	rseC	b2570	0.87	+2.3
2,705,761	-	rseC	b2570	0.87	-2.0
2,705,783	-				+3.6
2,705,783	-				+1.9
2,705,814	-				-0.3
2,705,915	+				-1.0
2,705,915	+				+0.2
2,705,923	-	rseB	b2571	0.11	-1.5
2,705,987	-	rseB	b2571	0.17	-0.9
2,706,013	+	rseB	b2571	0.20	-1.6
2,706,190	-	rseB	b2571	0.39	-0.3
2,706,190	-	rseB	b2571	0.39	-1.4
2,706,211	-	rseB	b2571	0.41	-1.1
2,706,307	+	rseB	b2571	0.51	-1.2
2,706,315	-	rseB	b2571	0.52	+0.4
2,706,315	-	rseB	b2571	0.52	+0.6
2,706,322	+	rseB	b2571	0.52	-0.9
2,706,397	-	rseB	b2571	0.60	-0.2
2,706,399	+	rseB	b2571	0.61	-1.2
2,706,524	+	rseB	b2571	0.74	+0.2
2,706,524	+	rseB	b2571	0.74	-2.0
2,706,576	+	rseB	b2571	0.79	-2.6
2,706,601	+	rseB	b2571	0.82	-1.3
2,706,601	+	rseB	b2571	0.82	-1.1
2,706,654	+	rseB	b2571	0.87	-1.6
2,706,696	+				-0.8
2,706,711	-				-1.5
2,706,711	-				-1.5
2,706,724	-				-1.7
2,706,738	+				-1.6
2,706,754	-				-1.0
2,706,754	-				-0.7
2,706,822	-				-1.1
2,706,822	-				-0.1
2,706,857	-	rseA	b2572	0.12	-1.2
2,706,857	-	rseA	b2572	0.12	-0.5
2,706,857	-	rseA	b2572	0.12	-1.3
2,706,867	-	rseA	b2572	0.14	-1.5
2,706,867	-	rseA	b2572	0.14	-1.0
2,706,909	-	rseA	b2572	0.20	-0.3
2,706,909	-	rseA	b2572	0.20	-0.5
2,706,945	-	rseA	b2572	0.26	+0.0
2,707,085	-	rseA	b2572	0.47	-1.5
2,707,102	-	rseA	b2572	0.50	-0.5
2,707,183	+	rseA	b2572	0.63	+0.0
2,707,254	+	rseA	b2572	0.73	+0.0
2,707,254	+	rseA	b2572	0.73	-1.0
2,707,426	-				+0.1
2,707,436	-				-0.3
2,707,436	-				-0.1
2,707,437	-				-0.0
2,707,440	+				-0.4