Strain Fitness in Escherichia coli BW25113 around b0763

Experiment: LB Anaerobic with Nalidixic 0.00000195313 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntmodE and ybhT are separated by 128 nucleotidesybhT and modA are separated by 166 nucleotidesmodA and modB overlap by 1 nucleotidesmodB and modC are separated by 2 nucleotides b0761: modE - DNA-binding transcriptional dual regulator (NCBI), at 793,079 to 793,867 modE b0762: ybhT - hypothetical protein (NCBI), at 793,996 to 794,145 ybhT b0763: modA - molybdate transporter subunit (NCBI), at 794,312 to 795,085 modA b0764: modB - molybdate ABC transporter permease protein (NCBI), at 795,085 to 795,774 modB b0765: modC - molybdate transporter subunit (NCBI), at 795,777 to 796,835 modC Position (kb) 794 795 796Strain fitness (log2 ratio) -2 -1 0 1at 793.538 kb on - strand, within modEat 793.538 kb on - strand, within modEat 793.629 kb on - strand, within modEat 793.629 kb on - strand, within modEat 793.631 kb on + strand, within modEat 793.631 kb on + strand, within modEat 793.636 kb on + strand, within modEat 793.639 kb on - strand, within modEat 793.639 kb on - strand, within modEat 793.639 kb on - strand, within modEat 793.683 kb on - strand, within modEat 793.683 kb on - strand, within modEat 793.685 kb on + strand, within modEat 793.735 kb on + strand, within modEat 793.735 kb on + strand, within modEat 793.837 kb on + strandat 793.847 kb on - strandat 793.864 kb on + strandat 793.864 kb on + strandat 793.872 kb on - strandat 793.872 kb on - strandat 793.942 kb on + strandat 793.942 kb on + strandat 794.427 kb on + strand, within modAat 794.450 kb on - strand, within modAat 794.521 kb on - strand, within modAat 794.527 kb on + strand, within modAat 794.606 kb on + strand, within modAat 794.606 kb on + strand, within modAat 794.628 kb on + strand, within modAat 794.800 kb on + strand, within modAat 794.876 kb on + strand, within modAat 794.989 kb on - strand, within modAat 795.088 kb on + strandat 795.113 kb on - strandat 795.153 kb on + strandat 795.230 kb on + strand, within modBat 795.330 kb on - strand, within modBat 795.549 kb on + strand, within modBat 795.549 kb on + strandat 795.552 kb on - strand, within modBat 795.638 kb on + strand, within modBat 795.638 kb on + strand, within modBat 795.642 kb on - strand, within modBat 795.644 kb on + strand, within modBat 795.646 kb on - strand, within modBat 795.695 kb on - strand, within modBat 795.811 kb on + strandat 795.811 kb on + strandat 795.820 kb on - strandat 795.820 kb on - strandat 796.082 kb on + strand, within modCat 796.082 kb on + strand, within modC

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction LB Anaerobic with Nalidixic 0.00000195313 mM
remove
793,538 - modE b0761 0.58 -1.0
793,538 - modE b0761 0.58 -0.7
793,629 - modE b0761 0.70 -0.6
793,629 - modE b0761 0.70 -1.0
793,631 + modE b0761 0.70 -1.5
793,631 + modE b0761 0.70 -0.1
793,636 + modE b0761 0.71 +0.1
793,639 - modE b0761 0.71 -1.1
793,639 - modE b0761 0.71 -0.8
793,639 - modE b0761 0.71 -1.9
793,683 - modE b0761 0.77 -0.4
793,683 - modE b0761 0.77 -0.6
793,685 + modE b0761 0.77 -0.4
793,735 + modE b0761 0.83 -0.4
793,735 + modE b0761 0.83 +0.5
793,837 + -1.6
793,847 - +0.3
793,864 + -1.2
793,864 + +0.0
793,872 - -0.6
793,872 - +0.9
793,942 + +0.0
793,942 + -1.2
794,427 + modA b0763 0.15 -1.4
794,450 - modA b0763 0.18 -0.8
794,521 - modA b0763 0.27 -1.0
794,527 + modA b0763 0.28 -2.3
794,606 + modA b0763 0.38 -1.1
794,606 + modA b0763 0.38 -0.2
794,628 + modA b0763 0.41 -1.1
794,800 + modA b0763 0.63 +0.0
794,876 + modA b0763 0.73 -0.6
794,989 - modA b0763 0.87 -0.7
795,088 + -0.1
795,113 - -1.5
795,153 + -2.0
795,230 + modB b0764 0.21 -0.2
795,330 - modB b0764 0.36 -0.5
795,549 + modB b0764 0.67 -0.7
795,549 + +0.6
795,552 - modB b0764 0.68 -1.8
795,638 + modB b0764 0.80 -0.8
795,638 + modB b0764 0.80 +0.0
795,642 - modB b0764 0.81 -0.2
795,644 + modB b0764 0.81 -1.0
795,646 - modB b0764 0.81 -2.4
795,695 - modB b0764 0.88 -0.9
795,811 + -1.2
795,811 + -1.2
795,820 - -0.4
795,820 - -1.6
796,082 + modC b0765 0.29 -0.3
796,082 + modC b0765 0.29 -0.8

Or see this region's nucleotide sequence