Strain Fitness in Escherichia coli BW25113 around b0862

Experiment: LB Anaerobic with Phenazine ethosulfate 0.000125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntartJ and artM are separated by 290 nucleotidesartM and artQ overlap by 1 nucleotidesartQ and artI are separated by 6 nucleotidesartI and artP are separated by 17 nucleotides b0860: artJ - arginine transporter subunit (NCBI), at 899,067 to 899,798 artJ b0861: artM - arginine transporter subunit (NCBI), at 900,089 to 900,757 artM b0862: artQ - arginine transporter subunit (NCBI), at 900,757 to 901,473 artQ b0863: artI - arginine transporter subunit (NCBI), at 901,480 to 902,211 artI b0864: artP - arginine transporter subunit (NCBI), at 902,229 to 902,957 artP Position (kb) 900 901 902Strain fitness (log2 ratio) -2 -1 0 1at 899.846 kb on - strandat 900.015 kb on + strandat 900.140 kb on - strandat 900.140 kb on - strandat 900.193 kb on + strand, within artMat 900.258 kb on - strand, within artMat 900.266 kb on - strand, within artMat 900.270 kb on - strand, within artMat 900.330 kb on - strand, within artMat 900.330 kb on - strand, within artMat 900.445 kb on + strand, within artMat 900.596 kb on - strand, within artMat 900.596 kb on - strand, within artMat 900.611 kb on - strand, within artMat 900.611 kb on - strand, within artMat 900.706 kb on + strandat 900.873 kb on + strand, within artQat 901.049 kb on + strand, within artQat 901.059 kb on + strand, within artQat 901.088 kb on + strand, within artQat 901.191 kb on + strand, within artQat 901.191 kb on + strand, within artQat 901.555 kb on - strand, within artIat 901.590 kb on - strand, within artIat 901.590 kb on - strand, within artIat 901.669 kb on - strand, within artIat 901.669 kb on - strand, within artIat 901.850 kb on + strand, within artIat 901.850 kb on + strand, within artIat 901.858 kb on + strand, within artIat 901.858 kb on - strand, within artIat 901.907 kb on + strand, within artIat 902.066 kb on - strand, within artIat 902.123 kb on - strand, within artIat 902.123 kb on - strand, within artIat 902.289 kb on + strandat 902.302 kb on - strand, within artP

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Anaerobic with Phenazine ethosulfate 0.000125 mM
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899,846 - -1.6
900,015 + +0.9
900,140 - +1.2
900,140 - -1.1
900,193 + artM b0861 0.16 -1.1
900,258 - artM b0861 0.25 -0.7
900,266 - artM b0861 0.26 +0.4
900,270 - artM b0861 0.27 +0.1
900,330 - artM b0861 0.36 +0.8
900,330 - artM b0861 0.36 -0.0
900,445 + artM b0861 0.53 +0.4
900,596 - artM b0861 0.76 -1.9
900,596 - artM b0861 0.76 -1.8
900,611 - artM b0861 0.78 -1.2
900,611 - artM b0861 0.78 +1.6
900,706 + -0.2
900,873 + artQ b0862 0.16 -0.8
901,049 + artQ b0862 0.41 +1.0
901,059 + artQ b0862 0.42 +0.8
901,088 + artQ b0862 0.46 +0.8
901,191 + artQ b0862 0.61 -0.0
901,191 + artQ b0862 0.61 -1.8
901,555 - artI b0863 0.10 -1.0
901,590 - artI b0863 0.15 -1.6
901,590 - artI b0863 0.15 -0.8
901,669 - artI b0863 0.26 -0.3
901,669 - artI b0863 0.26 +0.4
901,850 + artI b0863 0.51 +1.2
901,850 + artI b0863 0.51 +1.1
901,858 + artI b0863 0.52 -0.4
901,858 - artI b0863 0.52 -1.1
901,907 + artI b0863 0.58 -0.6
902,066 - artI b0863 0.80 -0.5
902,123 - artI b0863 0.88 -1.3
902,123 - artI b0863 0.88 -2.3
902,289 + -0.8
902,302 - artP b0864 0.10 +1.6

Or see this region's nucleotide sequence