Experiment: LB Anaerobic with Norfloxacin 0.00000015625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yccW and yccX are separated by 94 nucleotides yccX and yccK overlap by 4 nucleotides yccK and yccA are separated by 90 nucleotides yccA and serT are separated by 206 nucleotides serT and hyaA are separated by 426 nucleotides
b0967: yccW - predicted methyltransferase (RefSeq), at 1,028,002 to 1,029,192
yccW
b0968: yccX - predicted acylphosphatase (NCBI), at 1,029,287 to 1,029,565
yccX
b0969: yccK - putative sulfite reductase (EC 1.8.-.-) (VIMSS), at 1,029,562 to 1,029,891
yccK
b0970: yccA - inner membrane protein (NCBI), at 1,029,982 to 1,030,641
yccA
b0971: serT - tRNA-Ser (NCBI), at 1,030,848 to 1,030,935
serT
b0972: hyaA - hydrogenase 1, small subunit (NCBI), at 1,031,362 to 1,032,480
hyaA
Position (kb)
1029
1030
1031 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1028.984 kb on - strand, within yccW at 1029.155 kb on - strand at 1029.171 kb on - strand at 1029.269 kb on + strand at 1029.273 kb on - strand at 1029.273 kb on - strand at 1029.279 kb on - strand at 1029.322 kb on - strand, within yccX at 1029.322 kb on - strand, within yccX at 1029.343 kb on + strand, within yccX at 1029.348 kb on + strand, within yccX at 1029.477 kb on - strand, within yccX at 1029.477 kb on - strand, within yccX at 1029.501 kb on + strand, within yccX at 1029.529 kb on - strand, within yccX at 1029.529 kb on - strand, within yccX at 1029.860 kb on + strand at 1029.960 kb on + strand at 1029.980 kb on + strand at 1029.980 kb on + strand at 1030.084 kb on + strand, within yccA at 1030.154 kb on + strand, within yccA at 1030.275 kb on + strand, within yccA at 1030.314 kb on + strand, within yccA at 1030.314 kb on + strand, within yccA at 1030.322 kb on - strand, within yccA at 1030.322 kb on - strand, within yccA at 1030.556 kb on - strand, within yccA at 1030.592 kb on - strand at 1030.592 kb on - strand at 1030.597 kb on + strand at 1030.613 kb on - strand at 1030.700 kb on - strand at 1030.756 kb on + strand at 1030.830 kb on - strand at 1030.955 kb on - strand at 1031.232 kb on + strand at 1031.317 kb on - strand at 1031.352 kb on + strand at 1031.352 kb on + strand at 1031.352 kb on - strand at 1031.352 kb on - strand at 1031.405 kb on + strand at 1031.438 kb on - strand at 1031.458 kb on + strand at 1031.478 kb on + strand, within hyaA at 1031.511 kb on + strand, within hyaA at 1031.552 kb on + strand, within hyaA
Per-strain Table
Position Strand Gene LocusTag Fraction LB Anaerobic with Norfloxacin 0.00000015625 mM remove 1,028,984 - yccW b0967 0.82 -0.8 1,029,155 - -0.8 1,029,171 - -0.5 1,029,269 + +0.2 1,029,273 - -0.3 1,029,273 - -1.2 1,029,279 - +0.6 1,029,322 - yccX b0968 0.13 +1.0 1,029,322 - yccX b0968 0.13 -0.3 1,029,343 + yccX b0968 0.20 -0.7 1,029,348 + yccX b0968 0.22 -0.4 1,029,477 - yccX b0968 0.68 +1.7 1,029,477 - yccX b0968 0.68 -0.3 1,029,501 + yccX b0968 0.77 -2.6 1,029,529 - yccX b0968 0.87 -0.5 1,029,529 - yccX b0968 0.87 -0.1 1,029,860 + +2.7 1,029,960 + +0.7 1,029,980 + -0.9 1,029,980 + -0.0 1,030,084 + yccA b0970 0.15 +0.1 1,030,154 + yccA b0970 0.26 +1.7 1,030,275 + yccA b0970 0.44 -0.5 1,030,314 + yccA b0970 0.50 -1.5 1,030,314 + yccA b0970 0.50 +0.2 1,030,322 - yccA b0970 0.52 +0.6 1,030,322 - yccA b0970 0.52 +0.5 1,030,556 - yccA b0970 0.87 +0.6 1,030,592 - +0.1 1,030,592 - +1.1 1,030,597 + -1.1 1,030,613 - -0.7 1,030,700 - -0.6 1,030,756 + -1.2 1,030,830 - -0.2 1,030,955 - -2.4 1,031,232 + -0.3 1,031,317 - +0.4 1,031,352 + +0.2 1,031,352 + +0.0 1,031,352 - -1.6 1,031,352 - +0.4 1,031,405 + +0.8 1,031,438 - -0.3 1,031,458 + +0.7 1,031,478 + hyaA b0972 0.10 +1.5 1,031,511 + hyaA b0972 0.13 -0.2 1,031,552 + hyaA b0972 0.17 +0.5
Or see this region's nucleotide sequence