Strain Fitness in Pseudomonas putida KT2440 around PP_5310

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
6,055,841	+				-0.1
6,055,842	-				-1.9
6,055,873	+				+1.6
6,055,873	+				+0.1
6,055,873	+				+1.0
6,055,874	-				+2.2
6,055,891	-				+2.2
6,055,895	+				+2.2
6,056,038	-		PP_5309	0.18	+2.2
6,056,086	-		PP_5309	0.23	+0.6
6,056,168	+		PP_5309	0.32	+2.2
6,056,168	+		PP_5309	0.32	+2.2
6,056,168	+		PP_5309	0.32	+2.2
6,056,169	-		PP_5309	0.32	+1.2
6,056,240	+		PP_5309	0.39	+2.2
6,056,241	-		PP_5309	0.40	+2.2
6,056,241	-		PP_5309	0.40	+2.2
6,056,265	+		PP_5309	0.42	+2.2
6,056,265	+		PP_5309	0.42	+3.8
6,056,266	-		PP_5309	0.42	+2.2
6,056,266	-		PP_5309	0.42	+2.2
6,056,352	+		PP_5309	0.52	+2.2
6,056,353	-		PP_5309	0.52	+2.2
6,056,354	+		PP_5309	0.52	+0.6
6,056,354	+		PP_5309	0.52	+2.2
6,056,354	+		PP_5309	0.52	+2.2
6,056,354	+		PP_5309	0.52	+2.2
6,056,355	-		PP_5309	0.52	+2.2
6,056,355	-		PP_5309	0.52	+2.2
6,056,355	-		PP_5309	0.52	+2.2
6,056,484	+		PP_5309	0.66	+2.2
6,056,633	+		PP_5309	0.82	+1.2
6,056,835	+				+0.6
6,056,835	+				+0.6
6,057,086	+		PP_5310	0.14	-0.6
6,057,086	+		PP_5310	0.14	+0.7
6,057,087	-		PP_5310	0.14	+0.0
6,057,183	-		PP_5310	0.18	-0.1
6,057,254	+		PP_5310	0.22	+2.8
6,057,405	-		PP_5310	0.29	+0.6
6,057,588	-				+0.6
6,057,596	-		PP_5310	0.38	+0.6
6,057,650	+		PP_5310	0.41	-0.4
6,057,806	+		PP_5310	0.48	+2.2
6,057,807	-		PP_5310	0.48	+2.2
6,057,811	+		PP_5310	0.48	-0.6
6,057,811	+		PP_5310	0.48	+2.2
6,057,811	+		PP_5310	0.48	+1.8
6,057,811	+		PP_5310	0.48	+0.2
6,057,811	+		PP_5310	0.48	+0.2
6,057,812	-		PP_5310	0.48	+0.2
6,057,812	-		PP_5310	0.48	-0.1
6,057,812	-		PP_5310	0.48	-1.7
6,057,812	-		PP_5310	0.48	+1.2
6,057,865	+		PP_5310	0.51	-1.4
6,057,960	+		PP_5310	0.56	+2.2
6,057,961	-		PP_5310	0.56	-1.0
6,058,093	+		PP_5310	0.62	+1.2
6,058,122	-		PP_5310	0.63	+1.0
6,058,259	+		PP_5310	0.70	+2.2
6,058,322	+		PP_5310	0.73	+0.9
6,058,322	+		PP_5310	0.73	+2.2
6,058,322	+		PP_5310	0.73	+1.6
6,058,323	-		PP_5310	0.73	+2.2
6,058,323	-		PP_5310	0.73	+0.2
6,058,592	+		PP_5310	0.86	+2.2
6,058,593	-		PP_5310	0.86	+3.2
6,058,593	-		PP_5310	0.86	+0.6
6,058,593	-		PP_5310	0.86	+0.4
6,058,806	+				+4.2
6,058,807	-				+2.2
6,058,868	+				+0.1
6,058,868	+				-0.4
6,058,869	-				+0.7
6,058,869	-				+0.0
6,058,886	+				+0.4
6,058,926	+				+0.3
6,058,926	+				-0.0
6,058,926	+				+0.0
6,058,926	+				+0.6
6,058,926	+				+0.3
6,058,937	+				+0.0
6,058,944	+				-0.2
6,058,945	-				-0.4
6,058,945	-				+0.1
6,059,291	+		PP_5311	0.24	+0.3
6,059,326	+		PP_5311	0.26	+0.7
6,059,587	-		PP_5311	0.45	+0.2
6,059,678	+		PP_5311	0.51	-0.2
6,059,681	+		PP_5311	0.51	+0.8
6,059,681	+		PP_5311	0.51	+0.2
6,059,681	+		PP_5311	0.51	+0.8
6,059,682	-		PP_5311	0.51	+0.6
6,059,843	+		PP_5311	0.63	+1.1
6,059,843	+		PP_5311	0.63	-0.2