Strain Fitness in Pseudomonas putida KT2440 around PP_4156

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
4,695,375	-		PP_4155	0.26	+0.3
4,695,375	-		PP_4155	0.26	-0.3
4,695,535	+		PP_4155	0.39	-0.2
4,695,551	+		PP_4155	0.40	-0.0
4,695,551	+		PP_4155	0.40	+0.3
4,695,551	+		PP_4155	0.40	+1.7
4,695,552	-		PP_4155	0.40	-0.3
4,695,627	+		PP_4155	0.46	+0.9
4,695,628	-		PP_4155	0.46	+0.2
4,695,628	-		PP_4155	0.46	-0.9
4,695,691	+		PP_4155	0.52	+0.1
4,695,692	-		PP_4155	0.52	+0.1
4,696,127	+		PP_4155	0.87	-1.1
4,696,127	+		PP_4155	0.87	-1.4
4,696,127	+		PP_4155	0.87	-0.7
4,696,128	-		PP_4155	0.87	-0.2
4,696,219	+				+0.6
4,696,220	-				-0.8
4,696,220	-				+0.4
4,696,750	+		PP_4156	0.42	+2.4
4,696,751	-		PP_4156	0.42	+0.6
4,697,041	-		PP_4156	0.74	-0.2
4,697,086	-		PP_4156	0.79	+0.6
4,697,385	+				+0.7
4,697,456	+		PP_4157	0.17	-0.5
4,697,456	+		PP_4157	0.17	+0.5
4,697,457	-		PP_4157	0.17	+0.1
4,697,490	+		PP_4157	0.21	-0.0
4,697,490	+		PP_4157	0.21	-0.1
4,697,515	-		PP_4157	0.25	-1.1
4,697,558	+		PP_4157	0.31	+0.2
4,697,558	+		PP_4157	0.31	+0.3
4,697,559	-		PP_4157	0.31	+0.5
4,697,735	+		PP_4157	0.57	-0.1
4,697,735	+		PP_4157	0.57	-0.1
4,697,736	-		PP_4157	0.57	+0.6
4,697,736	-		PP_4157	0.57	+0.2
4,697,736	-		PP_4157	0.57	-0.3
4,697,839	+		PP_4157	0.72	-0.7
4,697,839	+		PP_4157	0.72	-0.3
4,697,839	+		PP_4157	0.72	+1.4
4,697,840	-		PP_4157	0.72	-2.4
4,697,951	+		PP_4157	0.88	+0.7
4,697,952	-		PP_4157	0.88	-0.1
4,697,952	-		PP_4157	0.88	+1.2
4,697,973	+				+0.7
4,697,974	-				+0.2
4,698,081	+				+1.7
4,698,081	+				-1.3
4,698,082	-				+0.7
4,698,082	-				+0.5
4,698,082	-				+0.4
4,698,082	-				+0.8
4,698,082	-				+0.7
4,698,082	-				+0.5
4,698,164	+				+0.2
4,698,165	-				-0.3
4,698,165	-				+0.5
4,698,218	-				+1.3
4,698,218	-				+0.6
4,698,218	-				+0.3
4,698,224	+				+1.0
4,698,225	-				+1.2
4,698,225	-				+0.6
4,698,225	-				-0.1
4,698,225	-				+1.4