Strain Fitness in Pseudomonas putida KT2440 around PP_3314

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
3,748,932	+				-0.6
3,748,933	-				-0.9
3,748,933	-				-0.0
3,748,933	-				-0.1
3,748,933	-				+0.4
3,748,933	-				+0.6
3,749,177	-		PP_3312	0.57	-0.6
3,749,223	-		PP_3312	0.69	-0.4
3,749,447	+				-1.4
3,749,447	+				+0.2
3,749,564	-		PP_3313	0.21	+0.4
3,749,645	+		PP_3313	0.43	-1.0
3,749,896	+				+0.2
3,749,897	-				-0.3
3,749,898	+				-0.9
3,749,898	+				-0.3
3,749,899	-				+1.7
3,749,899	-				-1.5
3,749,899	-				+0.1
3,749,899	-				-0.8
3,749,899	-				-0.7
3,750,026	+		PP_3314	0.31	+0.1
3,750,100	+		PP_3314	0.47	+0.9
3,750,162	-		PP_3314	0.61	-0.2
3,750,162	-		PP_3314	0.61	+0.6
3,750,162	-		PP_3314	0.61	+1.0
3,750,321	+				+0.6
3,750,321	+				-0.8
3,750,322	-				+0.1
3,750,322	-				-0.2
3,750,322	-				-0.2
3,750,335	+				+0.4
3,750,335	+				+0.3
3,750,336	-				-1.1
3,750,421	-				+0.4
3,750,421	-				-0.2
3,750,471	+				-1.2
3,750,472	-				-0.3
3,750,472	-				+0.0
3,750,530	+				+1.9
3,750,531	-				+0.2
3,750,841	+		PP_3315	0.66	-0.1
3,750,841	+		PP_3315	0.66	+0.2
3,750,856	+		PP_3315	0.69	-0.3
3,750,856	+		PP_3315	0.69	-2.9
3,750,929	+		PP_3315	0.85	-0.9
3,751,259	+				+0.3