Strain Fitness in Pseudomonas putida KT2440 around PP_2697

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
3,087,700	+				-1.3
3,087,701	-				-0.1
3,087,737	-		PP_2696	0.13	-0.6
3,087,737	-		PP_2696	0.13	+0.5
3,087,781	-		PP_2696	0.18	-0.3
3,087,781	-		PP_2696	0.18	+0.2
3,087,781	-		PP_2696	0.18	-0.2
3,087,784	+		PP_2696	0.18	-0.5
3,087,799	+		PP_2696	0.20	+0.1
3,087,800	-		PP_2696	0.20	-0.0
3,087,884	+		PP_2696	0.29	+0.6
3,087,884	+		PP_2696	0.29	+1.5
3,087,885	-		PP_2696	0.29	+0.5
3,087,885	-		PP_2696	0.29	-0.1
3,087,888	+		PP_2696	0.29	-1.1
3,087,888	+		PP_2696	0.29	-0.1
3,087,889	-		PP_2696	0.29	-0.7
3,087,962	-		PP_2696	0.37	+1.4
3,088,072	+		PP_2696	0.49	+0.5
3,088,072	+		PP_2696	0.49	-0.6
3,088,072	+		PP_2696	0.49	-0.1
3,088,073	-		PP_2696	0.49	-1.1
3,088,073	-		PP_2696	0.49	+0.5
3,088,073	-		PP_2696	0.49	-0.9
3,088,235	-		PP_2696	0.67	+0.2
3,088,235	-		PP_2696	0.67	-0.5
3,088,310	+		PP_2696	0.75	+0.7
3,088,533	+				-1.2
3,088,674	+				-1.1
3,088,689	+				+2.2
3,089,015	+		PP_2697	0.73	+1.1
3,089,022	+		PP_2697	0.74	-0.0
3,089,071	+		PP_2697	0.84	+0.4
3,089,071	+		PP_2697	0.84	-0.0
3,089,094	+		PP_2697	0.88	+0.2
3,089,094	+		PP_2697	0.88	+1.4
3,089,095	-		PP_2697	0.89	+0.2
3,089,095	-		PP_2697	0.89	-0.8
3,089,138	-				-0.6
3,089,155	+				+0.6
3,089,155	+				-0.6
3,089,156	-				+1.0
3,089,156	-				-0.4
3,089,156	-				-0.6
3,089,189	+				-0.5
3,089,251	-				+1.6
3,089,294	-		PP_2698	0.11	-0.7
3,089,294	-		PP_2698	0.11	+0.1
3,089,510	-				+1.0
3,089,572	+		PP_2698	0.38	-0.0
3,089,573	-		PP_2698	0.38	-1.2
3,089,579	+		PP_2698	0.39	-0.6
3,089,580	-		PP_2698	0.39	-0.2
3,089,580	-		PP_2698	0.39	-0.3
3,089,788	+		PP_2698	0.59	-0.4
3,089,788	+		PP_2698	0.59	-0.1
3,089,788	+		PP_2698	0.59	-0.7
3,089,788	+		PP_2698	0.59	-0.3
3,090,000	-		PP_2698	0.79	+1.2