Strain Fitness in Pseudomonas putida KT2440 around PP_2093

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
2,384,369	+		PP_2092	0.37	+0.7
2,384,370	-		PP_2092	0.38	+0.6
2,384,370	-		PP_2092	0.38	+1.0
2,384,372	+		PP_2092	0.38	+0.0
2,384,372	+		PP_2092	0.38	-0.2
2,384,399	+		PP_2092	0.40	+0.0
2,384,458	-		PP_2092	0.45	+0.5
2,384,730	-		PP_2092	0.67	-0.6
2,384,814	-		PP_2092	0.73	+0.4
2,384,814	-		PP_2092	0.73	+0.5
2,384,814	-		PP_2092	0.73	+0.9
2,384,814	-		PP_2092	0.73	+0.5
2,384,821	+		PP_2092	0.74	-1.0
2,384,821	+		PP_2092	0.74	-0.7
2,385,032	+				-1.2
2,385,033	-				+0.4
2,385,137	+				-0.6
2,385,393	+		PP_2093	0.16	-0.3
2,385,568	+		PP_2093	0.46	+2.6
2,385,568	+		PP_2093	0.46	+1.1
2,385,569	-		PP_2093	0.46	+2.1
2,385,580	+		PP_2093	0.48	+1.3
2,385,581	-		PP_2093	0.48	+0.3
2,385,582	+		PP_2093	0.49	+0.8
2,385,582	+		PP_2093	0.49	+1.1
2,385,583	-		PP_2093	0.49	+0.5
2,385,583	-		PP_2093	0.49	+0.4
2,385,583	-		PP_2093	0.49	-0.3
2,385,583	-		PP_2093	0.49	+0.3
2,385,583	-		PP_2093	0.49	+0.4
2,385,583	-		PP_2093	0.49	+1.4
2,385,583	-		PP_2093	0.49	-0.3
2,385,583	-		PP_2093	0.49	+0.3
2,385,583	-		PP_2093	0.49	-0.5
2,385,683	+		PP_2093	0.66	-0.4
2,385,683	+		PP_2093	0.66	+0.8
2,385,683	+		PP_2093	0.66	+0.3
2,385,683	+		PP_2093	0.66	+1.0
2,385,683	+		PP_2093	0.66	+0.3
2,385,684	-		PP_2093	0.66	-0.2
2,385,684	-		PP_2093	0.66	+1.8
2,385,684	-		PP_2093	0.66	+0.4
2,385,684	-		PP_2093	0.66	-2.1
2,386,056	-		PP_2094	0.14	+0.3
2,386,150	-		PP_2094	0.21	-0.4
2,386,164	-		PP_2094	0.23	+0.7
2,386,241	+		PP_2094	0.29	+0.3
2,386,241	+		PP_2094	0.29	-0.3
2,386,401	-		PP_2094	0.42	+0.4
2,386,588	+		PP_2094	0.58	-0.0
2,386,589	-		PP_2094	0.58	+0.3
2,386,638	-		PP_2094	0.62	-1.4
2,386,638	-		PP_2094	0.62	-0.2
2,386,640	+		PP_2094	0.62	+0.4
2,386,640	+		PP_2094	0.62	-3.1
2,386,641	-		PP_2094	0.62	-0.3
2,386,641	-		PP_2094	0.62	+0.3
2,386,773	+		PP_2094	0.73	+0.3
2,386,865	+		PP_2094	0.80	-0.5
2,386,866	-		PP_2094	0.80	+0.6
2,386,866	-		PP_2094	0.80	-1.4