Strain Fitness in Escherichia coli BW25113 around b3469

Experiment: LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
3,603,678	+				-0.1
3,603,726	+				+0.1
3,603,776	+				-0.3
3,603,812	+				-0.3
3,603,825	+				-0.7
3,603,825	+				+0.4
3,603,945	+	yhhN	b3468	0.27	-0.7
3,603,945	+	yhhN	b3468	0.27	+1.4
3,603,955	-	yhhN	b3468	0.29	+0.4
3,603,960	+	yhhN	b3468	0.30	+0.3
3,603,960	+	yhhN	b3468	0.30	-0.4
3,603,968	-	yhhN	b3468	0.31	-0.2
3,603,980	-	yhhN	b3468	0.33	-0.2
3,603,980	-	yhhN	b3468	0.33	+1.0
3,603,996	+	yhhN	b3468	0.35	-1.1
3,603,996	+	yhhN	b3468	0.35	+0.4
3,604,037	+	yhhN	b3468	0.42	-0.3
3,604,037	+	yhhN	b3468	0.42	-0.3
3,604,037	+	yhhN	b3468	0.42	+1.2
3,604,037	+	yhhN	b3468	0.42	+1.3
3,604,037	+	yhhN	b3468	0.42	-0.2
3,604,045	-	yhhN	b3468	0.43	+0.5
3,604,045	-	yhhN	b3468	0.43	+0.5
3,604,045	-	yhhN	b3468	0.43	+0.4
3,604,071	+	yhhN	b3468	0.47	-1.5
3,604,071	+	yhhN	b3468	0.47	-0.8
3,604,087	+	yhhN	b3468	0.50	-0.1
3,604,087	+	yhhN	b3468	0.50	+0.5
3,604,087	+	yhhN	b3468	0.50	-0.1
3,604,087	+	yhhN	b3468	0.50	-0.1
3,604,092	-	yhhN	b3468	0.51	-0.4
3,604,092	-	yhhN	b3468	0.51	+0.6
3,604,095	-	yhhN	b3468	0.51	-0.2
3,604,095	-	yhhN	b3468	0.51	-0.1
3,604,095	-	yhhN	b3468	0.51	+0.5
3,604,095	-	yhhN	b3468	0.51	-0.2
3,604,095	-	yhhN	b3468	0.51	+0.4
3,604,095	-	yhhN	b3468	0.51	+1.6
3,604,095	-	yhhN	b3468	0.51	+0.5
3,604,107	+	yhhN	b3468	0.53	-1.1
3,604,107	+	yhhN	b3468	0.53	+0.1
3,604,119	+	yhhN	b3468	0.55	+0.4
3,604,157	-	yhhN	b3468	0.61	+0.2
3,604,167	+	yhhN	b3468	0.63	+0.2
3,604,167	+	yhhN	b3468	0.63	+0.3
3,604,170	-	yhhN	b3468	0.63	+0.6
3,604,170	-	yhhN	b3468	0.63	+1.3
3,604,193	+	yhhN	b3468	0.67	+0.4
3,604,193	+	yhhN	b3468	0.67	+0.5
3,604,193	+	yhhN	b3468	0.67	-0.1
3,604,199	-	yhhN	b3468	0.68	+1.7
3,604,229	-	yhhN	b3468	0.73	+0.8
3,604,229	-	yhhN	b3468	0.73	-0.6
3,604,360	-				+0.4
3,604,387	+				+0.7
3,604,392	-				+0.4
3,604,392	-				+2.3
3,604,423	-				-0.1
3,604,549	+				-0.1
3,604,586	+				-0.3
3,604,594	-				-0.9
3,604,594	-				+0.3
3,604,594	-				-0.6
3,604,639	+				+0.4
3,604,716	+	zntA	b3469	0.11	+0.7
3,604,716	+	zntA	b3469	0.11	+1.3
3,604,780	+	zntA	b3469	0.14	-2.3
3,604,808	+	zntA	b3469	0.15	-0.9
3,604,808	+	zntA	b3469	0.15	-0.9
3,604,973	-	zntA	b3469	0.23	+2.3
3,604,973	-	zntA	b3469	0.23	-1.6
3,604,999	+	zntA	b3469	0.24	-0.7
3,605,025	-	zntA	b3469	0.25	-0.1
3,605,025	-	zntA	b3469	0.25	-0.3
3,605,049	-	zntA	b3469	0.26	-0.6
3,605,049	-	zntA	b3469	0.26	+0.7
3,605,058	+	zntA	b3469	0.27	+1.3
3,605,202	-	zntA	b3469	0.33	-0.6
3,605,207	-	zntA	b3469	0.33	-1.1
3,605,207	-	zntA	b3469	0.33	+0.7
3,605,298	+	zntA	b3469	0.37	-2.4
3,605,307	-	zntA	b3469	0.38	+0.7
3,605,368	+	zntA	b3469	0.41	-0.8
3,605,403	-	zntA	b3469	0.42	-0.1
3,605,403	-	zntA	b3469	0.42	+0.3
3,605,404	+	zntA	b3469	0.42	+1.3
3,605,404	+	zntA	b3469	0.42	+0.3
3,605,413	-	zntA	b3469	0.43	-0.7
3,605,413	-	zntA	b3469	0.43	-0.3
3,605,414	+	zntA	b3469	0.43	+2.3
3,605,426	+	zntA	b3469	0.43	+0.3
3,605,426	+	zntA	b3469	0.43	-0.1
3,605,427	+	zntA	b3469	0.43	-1.1
3,605,466	-	zntA	b3469	0.45	+0.9
3,605,495	+	zntA	b3469	0.46	-0.1
3,605,517	-	zntA	b3469	0.47	-1.6
3,605,529	+	zntA	b3469	0.48	+0.3
3,605,530	+	zntA	b3469	0.48	-0.6
3,605,613	+	zntA	b3469	0.52	+1.3
3,605,697	+	zntA	b3469	0.56	+0.3
3,605,712	+	zntA	b3469	0.56	+0.7
3,605,759	-	zntA	b3469	0.58	-0.7
3,605,759	-	zntA	b3469	0.58	-2.3
3,605,846	-	zntA	b3469	0.62	-0.1
3,605,849	+	zntA	b3469	0.63	+0.7
3,605,870	-	zntA	b3469	0.63	-0.7
3,605,905	+	zntA	b3469	0.65	-0.1
3,605,905	+	zntA	b3469	0.65	-0.9
3,605,909	+	zntA	b3469	0.65	-0.9
3,605,932	-	zntA	b3469	0.66	-1.3
3,606,008	-	zntA	b3469	0.70	+0.7
3,606,008	-	zntA	b3469	0.70	+0.7
3,606,008	-	zntA	b3469	0.70	+0.7
3,606,021	+	zntA	b3469	0.70	+0.7
3,606,069	-	zntA	b3469	0.73	-2.6
3,606,074	-	zntA	b3469	0.73	-1.2
3,606,078	+	zntA	b3469	0.73	+2.3
3,606,100	+	zntA	b3469	0.74	+0.7
3,606,100	+	zntA	b3469	0.74	-0.1
3,606,144	+	zntA	b3469	0.76	+0.4
3,606,198	+	zntA	b3469	0.78	-0.2
3,606,203	+	zntA	b3469	0.79	+0.3
3,606,222	-	zntA	b3469	0.79	-1.6
3,606,298	+	zntA	b3469	0.83	+1.3
3,606,326	+	zntA	b3469	0.84	-0.6
3,606,331	+	zntA	b3469	0.84	-0.5
3,606,350	-	zntA	b3469	0.85	+0.7
3,606,350	-	zntA	b3469	0.85	-0.1
3,606,367	-	zntA	b3469	0.86	-0.6
3,606,367	-	zntA	b3469	0.86	+1.3
3,606,367	-	zntA	b3469	0.86	+2.3
3,606,383	-	zntA	b3469	0.87	-0.1
3,606,383	-	zntA	b3469	0.87	+1.3
3,606,414	+	zntA	b3469	0.88	+2.3
3,606,414	+	zntA	b3469	0.88	-0.1
3,606,448	+	zntA	b3469	0.90	+0.4
3,606,448	+	zntA	b3469	0.90	+1.1
3,606,454	+				+0.7
3,606,454	+				+0.3
3,606,468	+				-0.3
3,606,478	+				-0.7
3,606,478	+				+1.3
3,606,590	+				-0.6
3,606,602	-				+1.0
3,606,629	-				-0.6
3,606,631	-				-1.6
3,606,636	-				-1.1
3,606,667	+				-0.7
3,606,713	-				+0.2
3,606,713	-				+0.3
3,606,723	-				+0.1
3,606,723	-				-0.6
3,606,723	-				-0.9
3,606,727	+				-0.3
3,606,727	+				+0.9
3,606,727	+				-1.0
3,606,735	-				-0.1
3,606,735	-				+0.4
3,606,735	-				-0.7
3,606,736	-				-1.1
3,606,775	-				+0.6
3,606,775	-				-0.5
3,606,987	+	yhhP	b3470	0.87	+0.7
3,606,997	+				-0.6
3,607,058	-				+1.6
3,607,059	-				-0.2
3,607,175	-				+0.2
3,607,177	+				-0.8
3,607,177	+				-0.1
3,607,214	-				-0.8
3,607,274	-				+1.0
3,607,274	-				+0.3
3,607,411	-	yhhQ	b3471	0.26	-1.1
3,607,435	+	yhhQ	b3471	0.29	+0.3
3,607,447	+	yhhQ	b3471	0.31	+0.1
3,607,466	+	yhhQ	b3471	0.34	+0.8
3,607,466	+	yhhQ	b3471	0.34	+0.3
3,607,482	-	yhhQ	b3471	0.36	-0.6
3,607,511	-	yhhQ	b3471	0.41	+1.4
3,607,542	+	yhhQ	b3471	0.45	-1.3
3,607,603	+	yhhQ	b3471	0.55	-0.3
3,607,603	+	yhhQ	b3471	0.55	+1.5
3,607,660	-	yhhQ	b3471	0.63	+0.3
3,607,660	-	yhhQ	b3471	0.63	+0.7