Strain Fitness in Escherichia coli BW25113 around b1953

Experiment: LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
2,022,049	+				-1.0
2,022,191	+	rcsA	b1951	0.32	+1.7
2,022,382	-	rcsA	b1951	0.62	+1.7
2,022,382	-	rcsA	b1951	0.62	+0.7
2,022,413	-	rcsA	b1951	0.67	+0.7
2,022,413	-	rcsA	b1951	0.67	+1.7
2,022,424	-	rcsA	b1951	0.69	+1.7
2,022,424	-	rcsA	b1951	0.69	+0.1
2,022,427	-	rcsA	b1951	0.70	+1.7
2,022,435	+	rcsA	b1951	0.71	+1.7
2,022,453	-	rcsA	b1951	0.74	+0.4
2,022,456	-	rcsA	b1951	0.74	+0.7
2,022,610	+				+1.7
2,022,610	+				+0.5
2,022,627	-				-0.2
2,022,637	-				-0.5
2,022,650	-				+0.5
2,022,650	-				+1.1
2,022,674	-				+0.1
2,022,674	-				-0.3
2,022,694	+	dsrB	b1952	0.19	-1.5
2,022,694	+	dsrB	b1952	0.19	-0.3
2,022,720	-	dsrB	b1952	0.32	-0.0
2,022,770	+	dsrB	b1952	0.59	+0.1
2,022,770	+	dsrB	b1952	0.59	+0.3
2,022,787	-	dsrB	b1952	0.68	-1.0
2,022,787	-	dsrB	b1952	0.68	-0.4
2,022,790	+	dsrB	b1952	0.69	+0.2
2,022,792	-	dsrB	b1952	0.70	+0.3
2,022,874	+				-0.4
2,022,874	+				+0.9
2,022,874	+				+1.2
2,022,940	+				-0.8
2,022,942	+				+1.2
2,023,038	-	b1953	b1953	0.12	+0.1
2,023,107	+	b1953	b1953	0.43	-0.2
2,023,138	+	b1953	b1953	0.56	-0.6
2,023,138	+	b1953	b1953	0.56	+1.4
2,023,138	+	b1953	b1953	0.56	+1.7
2,023,267	-	dsrA	b1954	0.18	-0.1
2,023,298	+	dsrA	b1954	0.54	-1.4
2,023,343	-				-1.7
2,023,343	-				-0.1
2,023,439	-				+0.1
2,023,439	-				-0.6
2,023,517	+				-1.1
2,023,525	-				-0.1
2,023,525	-				-0.6
2,023,540	-				-0.1
2,023,540	-				+0.3
2,023,604	-				-0.8
2,023,631	-	yedP	b1955	0.12	+0.5
2,023,767	-	yedP	b1955	0.28	+1.2
2,024,110	+	yedP	b1955	0.70	-0.3
2,024,134	+	yedP	b1955	0.73	-0.1
2,024,165	+	yedP	b1955	0.77	-1.4