Experiment: DL-glyceraldehyde (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3895 and Atu3896 are separated by 14 nucleotides Atu3896 and Atu3897 are separated by 37 nucleotides
Atu3895: Atu3895 - sugar ABC transporter ATPase, at 990,075 to 991,145
Atu3895
Atu3896: Atu3896 - sugar ABC transporter ATPase, at 991,160 to 992,230
Atu3896
Atu3897: Atu3897 - glycerol-3-phosphate dehydrogenase, at 992,268 to 993,791
Atu3897
Position (kb) 991
992
993 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 990.189 kb on + strand, within Atu3895 at 990.217 kb on + strand, within Atu3895 at 990.330 kb on - strand, within Atu3895 at 990.353 kb on + strand, within Atu3895 at 990.501 kb on + strand, within Atu3895 at 990.531 kb on - strand, within Atu3895 at 990.536 kb on - strand, within Atu3895 at 990.536 kb on - strand, within Atu3895 at 990.536 kb on - strand, within Atu3895 at 990.541 kb on + strand, within Atu3895 at 990.551 kb on + strand, within Atu3895 at 990.553 kb on - strand, within Atu3895 at 990.556 kb on + strand, within Atu3895 at 990.559 kb on - strand, within Atu3895 at 990.592 kb on + strand, within Atu3895 at 990.593 kb on - strand, within Atu3895 at 990.594 kb on + strand, within Atu3895 at 990.600 kb on - strand, within Atu3895 at 990.672 kb on - strand, within Atu3895 at 990.711 kb on - strand, within Atu3895 at 990.741 kb on + strand, within Atu3895 at 990.828 kb on - strand, within Atu3895 at 990.882 kb on - strand, within Atu3895 at 990.890 kb on + strand, within Atu3895 at 990.896 kb on - strand, within Atu3895 at 990.956 kb on + strand, within Atu3895 at 990.964 kb on - strand, within Atu3895 at 990.966 kb on + strand, within Atu3895 at 991.000 kb on + strand, within Atu3895 at 991.018 kb on + strand, within Atu3895 at 991.026 kb on - strand, within Atu3895 at 991.046 kb on + strand at 991.228 kb on + strand at 991.231 kb on + strand at 991.253 kb on + strand at 991.255 kb on + strand at 991.263 kb on - strand at 991.278 kb on + strand, within Atu3896 at 991.351 kb on + strand, within Atu3896 at 991.368 kb on + strand, within Atu3896 at 991.368 kb on + strand, within Atu3896 at 991.415 kb on + strand, within Atu3896 at 991.415 kb on + strand, within Atu3896 at 991.423 kb on - strand, within Atu3896 at 991.430 kb on - strand, within Atu3896 at 991.510 kb on + strand, within Atu3896 at 991.515 kb on + strand, within Atu3896 at 991.515 kb on + strand, within Atu3896 at 991.515 kb on - strand, within Atu3896 at 991.556 kb on + strand, within Atu3896 at 991.587 kb on + strand, within Atu3896 at 991.597 kb on - strand, within Atu3896 at 991.787 kb on + strand, within Atu3896 at 991.817 kb on - strand, within Atu3896 at 991.852 kb on + strand, within Atu3896 at 991.860 kb on - strand, within Atu3896 at 991.871 kb on + strand, within Atu3896 at 991.879 kb on - strand, within Atu3896 at 991.888 kb on - strand, within Atu3896 at 991.955 kb on - strand, within Atu3896 at 992.023 kb on - strand, within Atu3896 at 992.030 kb on + strand, within Atu3896 at 992.038 kb on + strand, within Atu3896 at 992.041 kb on - strand, within Atu3896 at 992.102 kb on - strand, within Atu3896 at 992.139 kb on + strand at 992.146 kb on + strand at 992.189 kb on - strand at 992.196 kb on + strand at 992.213 kb on - strand at 992.283 kb on - strand at 992.354 kb on + strand at 992.506 kb on - strand, within Atu3897 at 992.562 kb on + strand, within Atu3897 at 992.569 kb on + strand, within Atu3897 at 992.569 kb on + strand, within Atu3897 at 992.569 kb on + strand, within Atu3897 at 992.577 kb on - strand, within Atu3897 at 992.577 kb on - strand, within Atu3897 at 992.577 kb on - strand, within Atu3897 at 992.577 kb on - strand, within Atu3897 at 992.587 kb on - strand, within Atu3897 at 992.640 kb on - strand, within Atu3897 at 992.640 kb on - strand, within Atu3897 at 992.657 kb on + strand, within Atu3897 at 992.704 kb on + strand, within Atu3897 at 992.712 kb on - strand, within Atu3897 at 992.712 kb on - strand, within Atu3897 at 992.819 kb on - strand, within Atu3897 at 992.828 kb on + strand, within Atu3897 at 992.836 kb on - strand, within Atu3897 at 992.836 kb on - strand, within Atu3897 at 992.922 kb on + strand, within Atu3897 at 992.922 kb on + strand, within Atu3897 at 992.930 kb on - strand, within Atu3897 at 992.930 kb on - strand, within Atu3897 at 992.975 kb on + strand, within Atu3897 at 992.975 kb on + strand, within Atu3897 at 992.975 kb on + strand, within Atu3897 at 992.977 kb on + strand, within Atu3897 at 993.094 kb on - strand, within Atu3897 at 993.130 kb on + strand, within Atu3897 at 993.189 kb on - strand, within Atu3897
Per-strain Table
Position Strand Gene LocusTag Fraction DL-glyceraldehyde (C) remove 990,189 + Atu3895 0.11 -0.2 990,217 + Atu3895 0.13 -0.8 990,330 - Atu3895 0.24 +0.2 990,353 + Atu3895 0.26 -1.1 990,501 + Atu3895 0.40 -0.5 990,531 - Atu3895 0.43 -1.8 990,536 - Atu3895 0.43 +0.1 990,536 - Atu3895 0.43 -0.8 990,536 - Atu3895 0.43 -0.4 990,541 + Atu3895 0.44 -0.7 990,551 + Atu3895 0.44 -3.1 990,553 - Atu3895 0.45 -0.2 990,556 + Atu3895 0.45 -0.4 990,559 - Atu3895 0.45 -0.6 990,592 + Atu3895 0.48 +0.3 990,593 - Atu3895 0.48 -0.0 990,594 + Atu3895 0.48 -0.3 990,600 - Atu3895 0.49 -0.4 990,672 - Atu3895 0.56 -1.4 990,711 - Atu3895 0.59 -1.4 990,741 + Atu3895 0.62 -0.4 990,828 - Atu3895 0.70 -0.4 990,882 - Atu3895 0.75 -0.2 990,890 + Atu3895 0.76 +0.1 990,896 - Atu3895 0.77 -0.6 990,956 + Atu3895 0.82 -0.9 990,964 - Atu3895 0.83 -0.9 990,966 + Atu3895 0.83 -0.6 991,000 + Atu3895 0.86 -1.4 991,018 + Atu3895 0.88 -1.0 991,026 - Atu3895 0.89 -0.1 991,046 + -0.8 991,228 + -0.5 991,231 + +0.3 991,253 + -0.8 991,255 + -1.6 991,263 - -0.4 991,278 + Atu3896 0.11 -0.5 991,351 + Atu3896 0.18 -0.9 991,368 + Atu3896 0.19 -2.2 991,368 + Atu3896 0.19 -0.1 991,415 + Atu3896 0.24 -1.0 991,415 + Atu3896 0.24 -0.9 991,423 - Atu3896 0.25 +0.4 991,430 - Atu3896 0.25 -0.5 991,510 + Atu3896 0.33 -1.1 991,515 + Atu3896 0.33 +0.0 991,515 + Atu3896 0.33 -1.8 991,515 - Atu3896 0.33 -0.0 991,556 + Atu3896 0.37 -0.8 991,587 + Atu3896 0.40 -0.2 991,597 - Atu3896 0.41 -0.5 991,787 + Atu3896 0.59 -1.1 991,817 - Atu3896 0.61 -0.0 991,852 + Atu3896 0.65 -0.0 991,860 - Atu3896 0.65 -1.1 991,871 + Atu3896 0.66 -1.2 991,879 - Atu3896 0.67 -1.3 991,888 - Atu3896 0.68 -1.3 991,955 - Atu3896 0.74 -0.9 992,023 - Atu3896 0.81 -0.4 992,030 + Atu3896 0.81 +1.7 992,038 + Atu3896 0.82 +0.5 992,041 - Atu3896 0.82 -0.8 992,102 - Atu3896 0.88 -0.2 992,139 + -1.1 992,146 + -1.1 992,189 - -0.1 992,196 + -0.3 992,213 - -0.5 992,283 - +0.1 992,354 + -0.2 992,506 - Atu3897 0.16 +0.1 992,562 + Atu3897 0.19 -1.2 992,569 + Atu3897 0.20 -0.8 992,569 + Atu3897 0.20 -0.8 992,569 + Atu3897 0.20 -1.2 992,577 - Atu3897 0.20 -0.7 992,577 - Atu3897 0.20 -1.1 992,577 - Atu3897 0.20 -0.9 992,577 - Atu3897 0.20 +0.2 992,587 - Atu3897 0.21 -1.3 992,640 - Atu3897 0.24 -0.5 992,640 - Atu3897 0.24 -0.8 992,657 + Atu3897 0.26 -1.5 992,704 + Atu3897 0.29 -1.0 992,712 - Atu3897 0.29 -0.6 992,712 - Atu3897 0.29 -0.2 992,819 - Atu3897 0.36 -0.6 992,828 + Atu3897 0.37 +0.1 992,836 - Atu3897 0.37 -0.6 992,836 - Atu3897 0.37 -2.2 992,922 + Atu3897 0.43 -1.2 992,922 + Atu3897 0.43 +1.1 992,930 - Atu3897 0.43 -0.9 992,930 - Atu3897 0.43 -1.1 992,975 + Atu3897 0.46 -1.1 992,975 + Atu3897 0.46 -0.9 992,975 + Atu3897 0.46 -1.7 992,977 + Atu3897 0.47 -1.2 993,094 - Atu3897 0.54 -0.7 993,130 + Atu3897 0.57 -1.0 993,189 - Atu3897 0.60 -0.3
Or see this region's nucleotide sequence