Strain Fitness in Agrobacterium fabrum C58 around Atu3583

Experiment: Propan-1-ol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Propan-1-ol (C)
638,224	+		Atu3581	0.72	-3.4
638,277	+		Atu3581	0.75	-2.0
638,277	+		Atu3581	0.75	-3.0
638,315	-		Atu3581	0.77	-1.9
638,372	-		Atu3581	0.79	-1.3
638,382	-		Atu3581	0.80	+0.1
638,385	-		Atu3581	0.80	-2.9
638,599	+				-3.2
638,601	+				-2.1
638,601	+				-0.9
638,601	+				-1.9
638,607	-				-1.5
638,609	-				-2.1
638,628	-				-2.9
638,638	-				-0.8
638,638	-				-1.7
638,688	-				-1.2
638,877	+		Atu3582	0.21	-2.0
638,970	+		Atu3582	0.44	-2.9
639,011	+		Atu3582	0.53	-2.1
639,013	+		Atu3582	0.54	-1.2
639,016	+		Atu3582	0.55	-1.1
639,026	+		Atu3582	0.57	+1.4
639,186	+				-0.6
639,338	+		Atu3583	0.20	-2.6
639,346	-		Atu3583	0.22	-1.2
639,346	-		Atu3583	0.22	-0.7
639,463	+		Atu3583	0.43	-2.6
639,582	+		Atu3583	0.64	-1.8
639,590	-		Atu3583	0.65	-2.7
639,743	+				-1.4
639,748	+				-1.1
639,756	-				+1.4
639,756	-				-2.4
639,756	-				-1.6
639,855	+				-3.9
639,887	-		Atu8189	0.18	-0.7
639,894	-		Atu8189	0.20	-1.8
639,894	-		Atu8189	0.20	-1.2
640,041	+		Atu8189	0.59	-3.1
640,056	+		Atu8189	0.63	-0.1
640,099	-		Atu8189	0.74	-2.7
640,204	+				-2.1
640,237	+				-1.8
640,237	+				-2.2
640,237	+				-1.8
640,239	-				-1.2
640,269	-				-0.9
640,426	+		Atu3585	0.12	-2.9
640,518	+		Atu3585	0.22	-1.2
640,583	-		Atu3585	0.29	-0.9
640,583	-		Atu3585	0.29	-2.8
640,698	-		Atu3585	0.42	-2.9
640,755	+		Atu3585	0.48	-3.0