Strain Fitness in Agrobacterium fabrum C58 around Atu2019

Experiment: Propan-1-ol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Propan-1-ol (C)
1,979,097	+		Atu2016	0.48	+0.2
1,979,099	-		Atu2016	0.49	-0.0
1,979,105	-		Atu2016	0.50	+0.3
1,979,154	+		Atu2016	0.61	-0.4
1,979,154	+		Atu2016	0.61	-0.2
1,979,187	+		Atu2016	0.68	+0.3
1,979,247	+		Atu2016	0.82	-0.1
1,979,272	-		Atu2016	0.87	+0.6
1,979,370	-		Atu2017	0.14	+1.7
1,979,487	-		Atu2017	0.57	+0.2
1,979,613	+				+0.4
1,979,970	-				+0.1
1,981,065	-				-2.3
1,981,079	+				-0.8
1,981,082	-				+1.1
1,981,291	-		Atu2020	0.35	-0.4
1,981,386	-		Atu2020	0.50	+0.1
1,981,407	-		Atu2020	0.53	-0.2
1,981,589	-		Atu2020	0.81	-0.3
1,981,732	-				-2.9
1,981,790	-				-2.1
1,981,862	+				-0.2
1,981,862	+				+0.6
1,981,870	-				+0.5
1,981,880	-				+0.3
1,981,945	-				+1.2
1,982,001	+				+0.1