Strain Fitness in Agrobacterium fabrum C58 around Atu3630
Experiment: Propan-1-ol (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Propan-1-ol (C) |
|---|---|---|---|---|---|
| remove | |||||
| 681,699 | - | +0.3 | |||
| 682,887 | - | +1.0 | |||
| 682,962 | + | +0.1 | |||
| 682,989 | + | +0.1 | |||
| 682,994 | + | -0.1 | |||
| 683,002 | - | +0.1 | |||
| 683,002 | - | +0.1 | |||
| 683,002 | - | +0.2 | |||
| 683,002 | - | -0.1 | |||
| 683,002 | - | -0.4 | |||
| 683,002 | - | +0.5 | |||
| 683,052 | + | +0.1 | |||
| 683,061 | + | +0.2 | |||
| 683,066 | + | +1.5 | |||
| 683,077 | + | +0.1 | |||
| 683,580 | - | Atu3631 | 0.33 | +0.2 | |
| 683,609 | - | Atu3631 | 0.36 | -0.5 | |
| 683,615 | - | Atu3631 | 0.36 | -0.3 | |
| 683,646 | - | Atu3631 | 0.39 | +0.8 | |
| 683,648 | + | Atu3631 | 0.39 | -0.5 |
Or see this region's nucleotide sequence