Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3786

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
4,500,896	-		Psyr_3784	0.62	+0.5
4,500,896	-		Psyr_3784	0.62	+0.5
4,500,896	-		Psyr_3784	0.62	+1.7
4,500,915	+		Psyr_3784	0.66	-1.7
4,500,916	-		Psyr_3784	0.67	+2.2
4,500,916	-		Psyr_3784	0.67	-0.5
4,500,918	+		Psyr_3784	0.67	+0.5
4,500,927	-		Psyr_3784	0.69	+0.0
4,500,927	-		Psyr_3784	0.69	+1.1
4,501,028	-				+0.6
4,501,113	+				-0.6
4,501,114	-				-0.1
4,501,114	-				-0.9
4,501,219	+				+0.7
4,501,219	+				+0.1
4,501,219	+				-1.8
4,501,219	+				-2.8
4,501,219	+				-0.6
4,501,220	-				+0.2
4,501,220	-				-1.5
4,501,220	-				-0.7
4,501,220	-				-0.6
4,501,236	+				-0.4
4,501,236	+				-0.0
4,501,254	+				-0.4
4,501,293	+		Psyr_3785	0.16	-0.2
4,501,294	-		Psyr_3785	0.16	+0.0
4,501,294	-		Psyr_3785	0.16	-1.0
4,501,313	+		Psyr_3785	0.19	+1.4
4,501,313	+		Psyr_3785	0.19	-1.0
4,501,314	-		Psyr_3785	0.19	-0.7
4,501,375	-		Psyr_3785	0.29	-0.5
4,501,802	-				-2.1
4,501,802	-				+0.1
4,501,945	+				+1.8
4,501,945	+				-1.0
4,501,945	+				-0.0
4,501,946	-				+0.2
4,501,946	-				-0.6
4,502,021	+		Psyr_3786	0.15	+0.2
4,502,155	+		Psyr_3786	0.31	+1.7
4,502,155	+		Psyr_3786	0.31	+0.9
4,502,155	+		Psyr_3786	0.31	+0.1
4,502,156	-		Psyr_3786	0.31	-0.3
4,502,299	+		Psyr_3786	0.48	+1.6
4,502,299	+		Psyr_3786	0.48	-0.8
4,502,299	+		Psyr_3786	0.48	-0.2
4,502,300	-		Psyr_3786	0.48	-0.3
4,502,300	-		Psyr_3786	0.48	-1.1
4,502,375	-		Psyr_3786	0.57	+0.7
4,502,393	-		Psyr_3786	0.59	+0.3
4,502,469	+		Psyr_3786	0.68	-0.7
4,502,469	+		Psyr_3786	0.68	-0.5
4,502,469	+		Psyr_3786	0.68	-1.0
4,502,469	+		Psyr_3786	0.68	+0.1
4,502,469	+		Psyr_3786	0.68	-1.8
4,502,470	-		Psyr_3786	0.69	-0.6
4,502,572	+		Psyr_3786	0.81	-2.9
4,502,572	+		Psyr_3786	0.81	-0.8
4,502,572	+		Psyr_3786	0.81	+0.8
4,502,573	-		Psyr_3786	0.81	+0.2
4,502,573	-		Psyr_3786	0.81	+0.7
4,502,573	-		Psyr_3786	0.81	+0.3
4,502,573	-		Psyr_3786	0.81	-1.5
4,502,626	+		Psyr_3786	0.87	-0.3
4,502,627	-		Psyr_3786	0.87	+0.3
4,502,672	-				-1.7
4,502,672	-				+0.0
4,502,740	+				+0.1
4,502,749	+				-0.1
4,502,750	-				+0.5
4,502,765	+				-0.0
4,502,766	-				+0.7
4,502,987	+				-0.3
4,503,004	+				-0.4
4,503,019	+				-0.3
4,503,022	+				-0.1
4,503,022	+				+0.5
4,503,022	+				-1.2
4,503,022	+				+0.4
4,503,023	-				+1.2
4,503,028	+				+0.4
4,503,036	+				-0.0
4,503,036	+				+0.3
4,503,036	+				+0.4
4,503,037	-				+0.4
4,503,037	-				+0.4
4,503,037	-				-0.8
4,503,037	-				+0.8
4,503,319	+				-0.8
4,503,319	+				-0.5
4,503,320	-				-0.1
4,503,320	-				-0.5
4,503,334	+				+0.0
4,503,335	-				-2.4
4,503,340	+				-0.1
4,503,341	-				+1.5
4,503,372	+				-1.0
4,503,373	-				+1.5
4,503,373	-				-1.0
4,503,428	+		Psyr_3787	0.15	-0.4
4,503,428	+		Psyr_3787	0.15	-1.0
4,503,518	+		Psyr_3787	0.31	+0.1
4,503,575	+		Psyr_3787	0.41	-1.1
4,503,641	+		Psyr_3787	0.53	-0.4
4,503,651	+		Psyr_3787	0.55	-1.8
4,503,651	+		Psyr_3787	0.55	-1.2
4,503,651	+		Psyr_3787	0.55	-0.1
4,503,651	+		Psyr_3787	0.55	-0.0