Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1057

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
1,195,023	-		Psyr_1056	0.20	-2.5
1,195,152	+		Psyr_1056	0.31	-0.2
1,195,239	+		Psyr_1056	0.39	+0.1
1,195,240	-		Psyr_1056	0.39	-1.5
1,195,611	+		Psyr_1056	0.72	-1.4
1,195,611	+		Psyr_1056	0.72	+0.8
1,195,611	+		Psyr_1056	0.72	+0.9
1,195,611	+		Psyr_1056	0.72	-0.6
1,195,611	+		Psyr_1056	0.72	+0.3
1,195,611	+		Psyr_1056	0.72	-3.1
1,195,612	-		Psyr_1056	0.72	-1.9
1,195,612	-		Psyr_1056	0.72	-1.1
1,195,612	-		Psyr_1056	0.72	-1.1
1,195,728	+		Psyr_1056	0.82	-0.2
1,195,759	-		Psyr_1056	0.85	+0.1
1,195,922	-				+0.3
1,195,933	+				-0.2
1,195,933	+				+0.9
1,195,934	-				+0.7
1,195,934	-				+1.3
1,195,934	-				+0.2
1,195,934	-				+0.2
1,195,945	+				-1.2
1,195,999	+				+1.0
1,195,999	+				-0.3
1,196,000	-				-0.3
1,196,174	+		Psyr_1057	0.16	-1.0
1,196,174	+		Psyr_1057	0.16	+0.3
1,196,175	-		Psyr_1057	0.16	-1.5
1,196,375	+		Psyr_1057	0.30	+0.6
1,196,376	-		Psyr_1057	0.30	-0.7
1,196,376	-		Psyr_1057	0.30	-0.8
1,196,531	+		Psyr_1057	0.41	+0.0
1,196,531	+		Psyr_1057	0.41	-0.7
1,196,531	+		Psyr_1057	0.41	+1.8
1,196,531	+		Psyr_1057	0.41	+0.5
1,196,532	-		Psyr_1057	0.41	+2.1
1,196,532	-		Psyr_1057	0.41	+0.4
1,196,532	-		Psyr_1057	0.41	+0.7
1,196,532	-		Psyr_1057	0.41	-0.9
1,196,532	-		Psyr_1057	0.41	-0.3
1,196,532	-		Psyr_1057	0.41	-0.9
1,196,532	-		Psyr_1057	0.41	+0.8
1,196,558	+		Psyr_1057	0.43	+0.2
1,196,559	-		Psyr_1057	0.43	-1.1
1,196,672	+		Psyr_1057	0.51	-0.2
1,196,712	+		Psyr_1057	0.53	+0.7
1,196,713	-		Psyr_1057	0.54	-1.5
1,196,751	+		Psyr_1057	0.56	+0.2
1,196,785	-		Psyr_1057	0.59	+2.4
1,196,785	-		Psyr_1057	0.59	-0.0
1,196,873	+		Psyr_1057	0.65	-0.1
1,196,874	-		Psyr_1057	0.65	+0.8
1,196,874	-		Psyr_1057	0.65	-0.7
1,197,050	+		Psyr_1057	0.77	-0.4
1,197,225	-		Psyr_1057	0.89	-0.2
1,197,381	+				-0.5
1,197,381	+				+1.0
1,197,381	+				+0.2
1,197,382	-				-0.3
1,197,388	-				-1.4
1,197,457	-				+0.3
1,197,527	+				+0.0
1,197,739	+		Psyr_1058	0.21	+0.4
1,197,740	-		Psyr_1058	0.21	-0.2
1,197,761	+		Psyr_1058	0.23	-0.8
1,197,761	+		Psyr_1058	0.23	+0.8
1,197,832	+		Psyr_1058	0.27	-0.5
1,197,863	-		Psyr_1058	0.29	+0.9
1,197,863	-		Psyr_1058	0.29	+0.2
1,197,875	-		Psyr_1058	0.30	-0.5
1,198,067	-		Psyr_1058	0.42	+0.1
1,198,067	-		Psyr_1058	0.42	+0.3
1,198,084	+		Psyr_1058	0.43	+1.5
1,198,120	+		Psyr_1058	0.45	-1.5
1,198,121	-		Psyr_1058	0.45	-0.0
1,198,126	+		Psyr_1058	0.45	-0.7
1,198,127	-		Psyr_1058	0.45	+2.9
1,198,127	-		Psyr_1058	0.45	+0.4
1,198,127	-		Psyr_1058	0.45	+0.8
1,198,216	+		Psyr_1058	0.51	-1.0
1,198,216	+		Psyr_1058	0.51	-0.8
1,198,226	+		Psyr_1058	0.52	+1.4
1,198,226	+		Psyr_1058	0.52	+0.2
1,198,227	-		Psyr_1058	0.52	-0.3
1,198,227	-		Psyr_1058	0.52	-0.2