Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0641 and PP_5452 are separated by 982 nucleotides PP_5452 and PP_0642 overlap by 11 nucleotides PP_0642 and PP_0643 are separated by 31 nucleotides PP_0643 and PP_0645 are separated by 167 nucleotides
PP_0641: PP_0641 - conserved protein of unknown function, at 752,456 to 752,761
_0641
PP_5452: PP_5452 - protein of unknown function, at 753,744 to 753,926
_5452
PP_0642: PP_0642 - conserved membrane protein of unknown function, at 753,916 to 754,530
_0642
PP_0643: PP_0643 - protein of unknown function, at 754,562 to 754,744
_0643
PP_0645: PP_0645 - protein of unknown function, at 754,912 to 755,154
_0645
Position (kb) 753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 752.745 kb on - strand at 752.849 kb on + strand at 752.850 kb on - strand at 752.850 kb on - strand at 752.942 kb on + strand at 752.976 kb on + strand at 752.976 kb on + strand at 752.977 kb on - strand at 752.977 kb on - strand at 753.005 kb on + strand at 753.005 kb on + strand at 753.005 kb on + strand at 753.006 kb on - strand at 753.009 kb on + strand at 753.009 kb on + strand at 753.071 kb on + strand at 753.071 kb on + strand at 753.072 kb on - strand at 753.206 kb on + strand at 753.207 kb on - strand at 753.207 kb on - strand at 753.207 kb on - strand at 753.216 kb on - strand at 753.222 kb on + strand at 753.223 kb on - strand at 753.228 kb on - strand at 753.231 kb on + strand at 753.231 kb on + strand at 753.231 kb on + strand at 753.232 kb on - strand at 753.238 kb on + strand at 753.239 kb on - strand at 753.241 kb on + strand at 753.241 kb on + strand at 753.251 kb on + strand at 753.409 kb on + strand at 753.436 kb on + strand at 753.436 kb on + strand at 753.437 kb on - strand at 753.437 kb on - strand at 753.437 kb on - strand at 753.440 kb on + strand at 753.440 kb on + strand at 753.440 kb on + strand at 753.441 kb on - strand at 753.465 kb on + strand at 753.466 kb on - strand at 753.518 kb on - strand at 753.624 kb on - strand at 753.759 kb on + strand at 753.813 kb on + strand, within PP_5452 at 753.813 kb on + strand, within PP_5452 at 753.813 kb on + strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.814 kb on - strand, within PP_5452 at 753.827 kb on + strand, within PP_5452 at 753.827 kb on + strand, within PP_5452 at 753.915 kb on + strand at 753.915 kb on + strand at 753.915 kb on + strand at 753.941 kb on - strand at 753.959 kb on + strand at 753.959 kb on + strand at 753.959 kb on + strand at 754.210 kb on - strand, within PP_0642 at 754.229 kb on + strand, within PP_0642 at 754.432 kb on + strand, within PP_0642 at 754.432 kb on + strand, within PP_0642 at 754.432 kb on + strand, within PP_0642 at 754.433 kb on - strand, within PP_0642 at 754.664 kb on + strand, within PP_0643 at 754.664 kb on + strand, within PP_0643 at 754.665 kb on - strand, within PP_0643 at 754.856 kb on + strand at 754.857 kb on - strand at 754.857 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 752,745 - -1.1 752,849 + -3.1 752,850 - -2.2 752,850 - +0.7 752,942 + +1.8 752,976 + +1.1 752,976 + +1.4 752,977 - +1.3 752,977 - +0.1 753,005 + +0.3 753,005 + +0.1 753,005 + -1.8 753,006 - -0.0 753,009 + +0.6 753,009 + -1.1 753,071 + -0.0 753,071 + -0.7 753,072 - +0.2 753,206 + -0.4 753,207 - +0.1 753,207 - +0.1 753,207 - -0.0 753,216 - +0.9 753,222 + -0.5 753,223 - +0.7 753,228 - +1.0 753,231 + +0.5 753,231 + +0.6 753,231 + -0.3 753,232 - +1.6 753,238 + +0.8 753,239 - +0.5 753,241 + +0.0 753,241 + -0.5 753,251 + +0.7 753,409 + -0.1 753,436 + +0.6 753,436 + -0.8 753,437 - +0.2 753,437 - -1.1 753,437 - -3.6 753,440 + -0.8 753,440 + +0.5 753,440 + +0.1 753,441 - -0.9 753,465 + +0.9 753,466 - +1.4 753,518 - +0.8 753,624 - -1.8 753,759 + -0.0 753,813 + PP_5452 0.38 +1.0 753,813 + PP_5452 0.38 -0.2 753,813 + PP_5452 0.38 +1.4 753,814 - PP_5452 0.38 +0.2 753,814 - PP_5452 0.38 +0.1 753,814 - PP_5452 0.38 +0.8 753,814 - PP_5452 0.38 +0.9 753,814 - PP_5452 0.38 +0.0 753,814 - PP_5452 0.38 +0.4 753,814 - PP_5452 0.38 +1.1 753,827 + PP_5452 0.45 +0.6 753,827 + PP_5452 0.45 +0.9 753,915 + +0.9 753,915 + +0.5 753,915 + -0.3 753,941 - -0.6 753,959 + -1.7 753,959 + -0.3 753,959 + -0.4 754,210 - PP_0642 0.48 -0.4 754,229 + PP_0642 0.51 -0.4 754,432 + PP_0642 0.84 +0.6 754,432 + PP_0642 0.84 +0.3 754,432 + PP_0642 0.84 +0.6 754,433 - PP_0642 0.84 +0.4 754,664 + PP_0643 0.56 +0.7 754,664 + PP_0643 0.56 -0.7 754,665 - PP_0643 0.56 -0.6 754,856 + -0.4 754,857 - +0.7 754,857 - -0.1
Or see this region's nucleotide sequence