Strain Fitness in Escherichia coli BW25113 around b2961

Experiment: LB Aerobic with Ramoplanin 0.000125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Aerobic with Ramoplanin 0.000125 mM
3,100,069	-	yggL	b2959	0.73	-0.2
3,100,069	-	yggL	b2959	0.73	-1.8
3,100,096	+	yggL	b2959	0.82	-1.5
3,100,181	+				-2.0
3,100,187	-				-2.4
3,100,187	-				-1.9
3,100,189	-				-0.8
3,100,189	-				-2.5
3,100,250	+	yggH	b2960	0.13	+0.9
3,100,250	+	yggH	b2960	0.13	+0.3
3,100,258	-	yggH	b2960	0.14	-2.9
3,100,258	-	yggH	b2960	0.14	-1.9
3,100,258	-	yggH	b2960	0.14	-1.0
3,100,260	-	yggH	b2960	0.15	-0.9
3,100,393	-	yggH	b2960	0.33	-2.3
3,100,406	-	yggH	b2960	0.35	-2.6
3,100,441	+	yggH	b2960	0.40	-1.9
3,100,441	+	yggH	b2960	0.40	-2.5
3,100,474	+	yggH	b2960	0.44	-1.7
3,100,521	-	yggH	b2960	0.51	-2.3
3,100,521	-	yggH	b2960	0.51	-1.2
3,100,568	-	yggH	b2960	0.57	-1.9
3,100,600	+	yggH	b2960	0.62	-2.0
3,100,600	+	yggH	b2960	0.62	-1.7
3,100,616	-	yggH	b2960	0.64	-1.3
3,100,827	-				-0.8
3,100,829	-				-1.8
3,100,974	+				-0.6
3,100,974	+				+2.4
3,100,974	+				-0.4
3,101,012	-				+0.2
3,101,070	-				-2.2
3,101,070	-				-1.0
3,101,122	+				-1.6
3,101,122	+				+0.8
3,101,124	+				+0.1
3,101,124	+				+1.8
3,101,251	+	mutY	b2961	0.21	-0.1
3,101,251	+	mutY	b2961	0.21	+0.2
3,101,259	+	mutY	b2961	0.21	-1.1
3,101,259	+	mutY	b2961	0.21	-0.8
3,101,430	+	mutY	b2961	0.38	-0.9
3,101,430	+	mutY	b2961	0.38	-0.1
3,101,456	-	mutY	b2961	0.40	+0.4
3,101,462	-	mutY	b2961	0.41	+0.7
3,101,462	-	mutY	b2961	0.41	-0.8
3,101,483	-	mutY	b2961	0.43	-0.4
3,101,483	-	mutY	b2961	0.43	+0.4
3,101,483	-	mutY	b2961	0.43	+0.7
3,101,483	-	mutY	b2961	0.43	-0.5
3,101,561	+	mutY	b2961	0.50	+0.8
3,101,605	+	mutY	b2961	0.54	+1.1
3,101,620	+	mutY	b2961	0.56	+2.9
3,101,811	-	mutY	b2961	0.74	+1.0
3,101,911	+	mutY	b2961	0.83	+1.4
3,101,942	+	mutY	b2961	0.86	+0.2
3,102,040	+				-0.0
3,102,152	+	yggX	b2962	0.13	+1.2
3,102,350	-	yggX	b2962	0.85	-1.6
3,102,350	-	yggX	b2962	0.85	-0.9
3,102,352	+	yggX	b2962	0.86	+0.2
3,102,352	+	yggX	b2962	0.86	+0.3
3,102,352	-	yggX	b2962	0.86	-0.1
3,102,443	-				-0.8
3,102,604	+	mltC	b2963	0.14	+0.1
3,102,604	+	mltC	b2963	0.14	-1.9
3,102,612	-	mltC	b2963	0.15	-2.0
3,102,622	-	mltC	b2963	0.15	-0.1
3,102,623	-	mltC	b2963	0.16	-0.6
3,102,623	-	mltC	b2963	0.16	-1.3
3,102,631	-	mltC	b2963	0.16	-1.3
3,102,636	+	mltC	b2963	0.17	-0.9
3,102,636	+	mltC	b2963	0.17	-0.9
3,102,636	+	mltC	b2963	0.17	-0.5
3,102,638	+	mltC	b2963	0.17	-0.1
3,102,638	+	mltC	b2963	0.17	-0.9
3,102,644	-	mltC	b2963	0.17	+0.3
3,102,644	-	mltC	b2963	0.17	-0.7
3,102,646	-	mltC	b2963	0.18	-1.9
3,102,648	+	mltC	b2963	0.18	-3.2
3,102,648	+	mltC	b2963	0.18	-0.6
3,102,676	-	mltC	b2963	0.20	-1.3
3,102,694	+	mltC	b2963	0.22	-2.3
3,102,700	-	mltC	b2963	0.23	+0.7
3,102,700	-	mltC	b2963	0.23	-1.9
3,102,729	+	mltC	b2963	0.25	-0.5
3,102,729	+	mltC	b2963	0.25	-0.8
3,102,737	-	mltC	b2963	0.26	+0.3
3,102,737	-	mltC	b2963	0.26	-1.2
3,102,789	+	mltC	b2963	0.31	+0.1
3,102,816	-	mltC	b2963	0.33	-0.6
3,102,858	+	mltC	b2963	0.37	-1.3
3,102,868	+	mltC	b2963	0.38	+0.9
3,102,960	-	mltC	b2963	0.47	-0.8
3,102,964	+	mltC	b2963	0.47	-0.9
3,102,964	+	mltC	b2963	0.47	-0.3
3,102,973	+	mltC	b2963	0.48	-0.5
3,102,974	-	mltC	b2963	0.48	-0.8
3,102,974	-	mltC	b2963	0.48	-1.7
3,102,985	+	mltC	b2963	0.49	-1.6
3,102,985	+	mltC	b2963	0.49	-2.5
3,102,992	-	mltC	b2963	0.50	-0.8
3,102,995	-	mltC	b2963	0.50	-1.5
3,103,017	-	mltC	b2963	0.52	-0.2
3,103,024	+	mltC	b2963	0.53	-1.7