Strain Fitness in Escherichia coli BW25113 around b2032

Experiment: LB Aerobic with Ramoplanin 0.000125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntinsH-7 and wbbK are separated by 479 nucleotideswbbK and wbbJ overlap by 16 nucleotideswbbJ and wbbI overlap by 20 nucleotides b2030: insH-7 - IS5 transposase and trans-activator (NCBI), at 2,099,919 to 2,100,935 insH-7 b2032: wbbK - lipopolysaccharide biosynthesis protein (NCBI), at 2,101,415 to 2,102,533 wbbK b2033: wbbJ - predicted acyl transferase (NCBI), at 2,102,518 to 2,103,108 wbbJ b2034: wbbI - hypothetical protein (NCBI), at 2,103,089 to 2,104,081 wbbI Position (kb) 2101 2102 2103Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2101.063 kb on + strandat 2101.087 kb on - strandat 2101.138 kb on + strandat 2101.139 kb on + strandat 2101.204 kb on - strandat 2101.204 kb on - strandat 2101.253 kb on - strandat 2101.253 kb on - strandat 2101.257 kb on - strandat 2101.263 kb on - strandat 2101.263 kb on - strandat 2101.284 kb on - strandat 2101.296 kb on - strandat 2101.330 kb on - strandat 2101.338 kb on - strandat 2101.339 kb on - strandat 2101.385 kb on - strandat 2101.386 kb on - strandat 2101.600 kb on - strand, within wbbKat 2101.637 kb on - strand, within wbbKat 2101.638 kb on - strand, within wbbKat 2101.651 kb on - strand, within wbbKat 2101.657 kb on - strand, within wbbKat 2101.659 kb on - strand, within wbbKat 2101.659 kb on - strand, within wbbKat 2101.659 kb on - strand, within wbbKat 2101.659 kb on - strand, within wbbKat 2101.659 kb on - strand, within wbbKat 2101.670 kb on - strand, within wbbKat 2101.670 kb on - strand, within wbbKat 2101.670 kb on - strand, within wbbKat 2101.670 kb on - strand, within wbbKat 2101.670 kb on - strand, within wbbKat 2101.672 kb on - strand, within wbbKat 2101.791 kb on - strand, within wbbKat 2101.827 kb on - strand, within wbbKat 2101.827 kb on - strand, within wbbKat 2101.832 kb on - strand, within wbbKat 2101.832 kb on - strand, within wbbKat 2101.833 kb on - strand, within wbbKat 2101.921 kb on - strand, within wbbKat 2101.921 kb on - strand, within wbbKat 2101.950 kb on - strand, within wbbKat 2101.961 kb on - strand, within wbbKat 2102.023 kb on - strand, within wbbKat 2102.023 kb on - strand, within wbbKat 2102.032 kb on - strand, within wbbKat 2102.134 kb on - strand, within wbbKat 2102.134 kb on - strand, within wbbKat 2102.166 kb on - strand, within wbbKat 2102.166 kb on - strand, within wbbKat 2102.211 kb on - strand, within wbbKat 2102.211 kb on - strand, within wbbKat 2102.211 kb on - strand, within wbbKat 2102.211 kb on - strand, within wbbKat 2102.242 kb on - strand, within wbbKat 2102.242 kb on - strand, within wbbKat 2102.253 kb on - strand, within wbbKat 2102.280 kb on - strand, within wbbKat 2102.350 kb on - strand, within wbbKat 2102.351 kb on - strand, within wbbKat 2102.358 kb on - strand, within wbbKat 2102.406 kb on - strand, within wbbKat 2102.414 kb on - strand, within wbbKat 2102.418 kb on - strand, within wbbKat 2102.500 kb on - strandat 2102.587 kb on - strand, within wbbJat 2102.589 kb on - strand, within wbbJat 2102.640 kb on - strand, within wbbJat 2102.686 kb on - strand, within wbbJat 2102.694 kb on - strand, within wbbJat 2102.702 kb on - strand, within wbbJat 2102.769 kb on - strand, within wbbJat 2102.769 kb on - strand, within wbbJat 2102.783 kb on - strand, within wbbJat 2102.828 kb on - strand, within wbbJat 2102.828 kb on - strand, within wbbJat 2102.833 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.848 kb on - strand, within wbbJat 2102.871 kb on - strand, within wbbJat 2102.876 kb on - strand, within wbbJat 2102.933 kb on - strand, within wbbJat 2102.939 kb on - strand, within wbbJat 2102.939 kb on - strand, within wbbJat 2102.939 kb on - strand, within wbbJat 2102.996 kb on - strand, within wbbJat 2103.057 kb on - strandat 2103.059 kb on - strandat 2103.116 kb on - strandat 2103.126 kb on - strandat 2103.126 kb on - strandat 2103.126 kb on - strandat 2103.137 kb on - strandat 2103.215 kb on - strand, within wbbIat 2103.215 kb on - strand, within wbbIat 2103.215 kb on - strand, within wbbIat 2103.215 kb on - strand, within wbbIat 2103.242 kb on - strand, within wbbIat 2103.251 kb on - strand, within wbbIat 2103.251 kb on - strand, within wbbIat 2103.252 kb on - strand, within wbbIat 2103.349 kb on - strand, within wbbIat 2103.362 kb on - strand, within wbbIat 2103.382 kb on - strand, within wbbIat 2103.382 kb on - strand, within wbbIat 2103.392 kb on - strand, within wbbIat 2103.393 kb on - strand, within wbbIat 2103.436 kb on - strand, within wbbIat 2103.436 kb on - strand, within wbbIat 2103.449 kb on - strand, within wbbIat 2103.490 kb on - strand, within wbbIat 2103.490 kb on - strand, within wbbI

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Per-strain Table

Position Strand Gene LocusTag Fraction LB Aerobic with Ramoplanin 0.000125 mM
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2,101,063 + +1.5
2,101,087 - +2.1
2,101,138 + -2.0
2,101,139 + +1.5
2,101,204 - +0.7
2,101,204 - -0.1
2,101,253 - -0.1
2,101,253 - +2.5
2,101,257 - +0.8
2,101,263 - +0.5
2,101,263 - -1.5
2,101,284 - -1.5
2,101,296 - -0.5
2,101,330 - -1.1
2,101,338 - +0.8
2,101,339 - +1.2
2,101,385 - -1.3
2,101,386 - -0.5
2,101,600 - wbbK b2032 0.17 -1.5
2,101,637 - wbbK b2032 0.20 +0.8
2,101,638 - wbbK b2032 0.20 -1.0
2,101,651 - wbbK b2032 0.21 +2.8
2,101,657 - wbbK b2032 0.22 -0.1
2,101,659 - wbbK b2032 0.22 -0.1
2,101,659 - wbbK b2032 0.22 +1.0
2,101,659 - wbbK b2032 0.22 -1.1
2,101,659 - wbbK b2032 0.22 -1.1
2,101,659 - wbbK b2032 0.22 -0.7
2,101,670 - wbbK b2032 0.23 +0.1
2,101,670 - wbbK b2032 0.23 +0.9
2,101,670 - wbbK b2032 0.23 -1.5
2,101,670 - wbbK b2032 0.23 +0.5
2,101,670 - wbbK b2032 0.23 -0.5
2,101,672 - wbbK b2032 0.23 -0.3
2,101,791 - wbbK b2032 0.34 +1.1
2,101,827 - wbbK b2032 0.37 -0.5
2,101,827 - wbbK b2032 0.37 +0.5
2,101,832 - wbbK b2032 0.37 -1.3
2,101,832 - wbbK b2032 0.37 -1.5
2,101,833 - wbbK b2032 0.37 -0.2
2,101,921 - wbbK b2032 0.45 +0.3
2,101,921 - wbbK b2032 0.45 -0.2
2,101,950 - wbbK b2032 0.48 -1.1
2,101,961 - wbbK b2032 0.49 -0.3
2,102,023 - wbbK b2032 0.54 +0.5
2,102,023 - wbbK b2032 0.54 -0.5
2,102,032 - wbbK b2032 0.55 +0.5
2,102,134 - wbbK b2032 0.64 +0.0
2,102,134 - wbbK b2032 0.64 -2.0
2,102,166 - wbbK b2032 0.67 +1.2
2,102,166 - wbbK b2032 0.67 -0.8
2,102,211 - wbbK b2032 0.71 -0.1
2,102,211 - wbbK b2032 0.71 -0.5
2,102,211 - wbbK b2032 0.71 -0.5
2,102,211 - wbbK b2032 0.71 -2.1
2,102,242 - wbbK b2032 0.74 -1.3
2,102,242 - wbbK b2032 0.74 -1.8
2,102,253 - wbbK b2032 0.75 -0.7
2,102,280 - wbbK b2032 0.77 -1.1
2,102,350 - wbbK b2032 0.84 -1.8
2,102,351 - wbbK b2032 0.84 -0.5
2,102,358 - wbbK b2032 0.84 +1.0
2,102,406 - wbbK b2032 0.89 -1.0
2,102,414 - wbbK b2032 0.89 -0.3
2,102,418 - wbbK b2032 0.90 -0.7
2,102,500 - +0.2
2,102,587 - wbbJ b2033 0.12 -1.3
2,102,589 - wbbJ b2033 0.12 -1.1
2,102,640 - wbbJ b2033 0.21 -1.7
2,102,686 - wbbJ b2033 0.28 -2.1
2,102,694 - wbbJ b2033 0.30 -1.1
2,102,702 - wbbJ b2033 0.31 +2.8
2,102,769 - wbbJ b2033 0.42 +1.6
2,102,769 - wbbJ b2033 0.42 +0.5
2,102,783 - wbbJ b2033 0.45 +0.8
2,102,828 - wbbJ b2033 0.52 -0.5
2,102,828 - wbbJ b2033 0.52 -2.0
2,102,833 - wbbJ b2033 0.53 -0.2
2,102,848 - wbbJ b2033 0.56 -1.0
2,102,848 - wbbJ b2033 0.56 -1.7
2,102,848 - wbbJ b2033 0.56 -0.1
2,102,848 - wbbJ b2033 0.56 +0.3
2,102,848 - wbbJ b2033 0.56 -1.2
2,102,848 - wbbJ b2033 0.56 +0.0
2,102,848 - wbbJ b2033 0.56 -0.8
2,102,871 - wbbJ b2033 0.60 +0.0
2,102,876 - wbbJ b2033 0.61 -2.0
2,102,933 - wbbJ b2033 0.70 -1.2
2,102,939 - wbbJ b2033 0.71 -0.5
2,102,939 - wbbJ b2033 0.71 -0.5
2,102,939 - wbbJ b2033 0.71 +0.8
2,102,996 - wbbJ b2033 0.81 -1.3
2,103,057 - -0.2
2,103,059 - +2.1
2,103,116 - +1.6
2,103,126 - -1.7
2,103,126 - +0.0
2,103,126 - -0.9
2,103,137 - -0.4
2,103,215 - wbbI b2034 0.13 +0.2
2,103,215 - wbbI b2034 0.13 -1.1
2,103,215 - wbbI b2034 0.13 +0.3
2,103,215 - wbbI b2034 0.13 -3.0
2,103,242 - wbbI b2034 0.15 -0.6
2,103,251 - wbbI b2034 0.16 -0.8
2,103,251 - wbbI b2034 0.16 -1.5
2,103,252 - wbbI b2034 0.16 +0.4
2,103,349 - wbbI b2034 0.26 -1.5
2,103,362 - wbbI b2034 0.27 -0.4
2,103,382 - wbbI b2034 0.30 -0.9
2,103,382 - wbbI b2034 0.30 -0.2
2,103,392 - wbbI b2034 0.31 -1.2
2,103,393 - wbbI b2034 0.31 +0.4
2,103,436 - wbbI b2034 0.35 -1.7
2,103,436 - wbbI b2034 0.35 -1.0
2,103,449 - wbbI b2034 0.36 +0.7
2,103,490 - wbbI b2034 0.40 -0.1
2,103,490 - wbbI b2034 0.40 -0.0

Or see this region's nucleotide sequence