Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_4193
Experiment: KB with Novobiocin 7.75 ug/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KB with Novobiocin 7.75 ug/ml |
---|---|---|---|---|---|
remove | |||||
4,988,204 | - | +0.2 | |||
4,988,208 | - | -1.0 | |||
4,988,208 | - | -2.8 | |||
4,988,254 | - | +0.5 | |||
4,988,254 | - | -0.3 | |||
4,988,254 | - | +0.3 | |||
4,988,254 | - | -1.4 | |||
4,988,254 | - | +1.0 | |||
4,988,254 | - | -0.3 | |||
4,988,254 | - | -1.1 | |||
4,988,254 | - | +0.5 | |||
4,988,258 | - | -0.8 | |||
4,988,258 | - | -3.0 | |||
4,988,258 | - | -0.3 | |||
4,988,258 | - | -0.5 | |||
4,988,258 | - | -0.5 | |||
4,988,258 | - | -0.3 | |||
4,988,258 | - | +0.4 | |||
4,988,258 | - | +0.5 | |||
4,988,258 | - | -1.0 | |||
4,988,318 | - | +0.8 | |||
4,988,318 | - | +0.1 | |||
4,988,323 | - | -1.1 | |||
4,988,400 | + | -3.9 | |||
4,988,400 | + | -0.2 | |||
4,988,400 | + | -0.1 | |||
4,988,401 | - | -0.3 | |||
4,989,547 | - | Psyr_4194 | 0.28 | -1.4 |
Or see this region's nucleotide sequence