Experiment: KB with Novobiocin 7.75 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4153 and Psyr_4154 are separated by 988 nucleotides Psyr_4154 and Psyr_4155 are separated by 107 nucleotides Psyr_4155 and Psyr_4156 are separated by 48 nucleotides
Psyr_4153: Psyr_4153 - conserved hypothetical protein, at 4,938,877 to 4,939,338
_4153
Psyr_4154: Psyr_4154 - microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62, at 4,940,327 to 4,941,673
_4154
Psyr_4155: Psyr_4155 - Protein of unknown function DUF615, at 4,941,781 to 4,942,302
_4155
Psyr_4156: Psyr_4156 - microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62, at 4,942,351 to 4,943,790
_4156
Position (kb) 4940
4941
4942 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4939.344 kb on - strand at 4939.344 kb on - strand at 4939.344 kb on - strand at 4939.425 kb on + strand at 4939.425 kb on + strand at 4939.426 kb on - strand at 4939.426 kb on - strand at 4939.426 kb on - strand at 4939.426 kb on - strand at 4939.503 kb on - strand at 4939.863 kb on - strand at 4939.977 kb on - strand at 4939.977 kb on - strand at 4939.977 kb on - strand at 4939.977 kb on - strand at 4940.090 kb on - strand at 4940.121 kb on + strand at 4940.517 kb on + strand, within Psyr_4154 at 4940.518 kb on - strand, within Psyr_4154 at 4940.685 kb on + strand, within Psyr_4154 at 4940.685 kb on + strand, within Psyr_4154 at 4940.686 kb on - strand, within Psyr_4154 at 4940.686 kb on - strand, within Psyr_4154 at 4940.686 kb on - strand, within Psyr_4154 at 4940.700 kb on + strand, within Psyr_4154 at 4940.700 kb on + strand, within Psyr_4154 at 4940.700 kb on + strand, within Psyr_4154 at 4940.700 kb on + strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4940.701 kb on - strand, within Psyr_4154 at 4941.061 kb on - strand, within Psyr_4154 at 4941.066 kb on + strand, within Psyr_4154 at 4941.196 kb on + strand, within Psyr_4154 at 4941.468 kb on + strand, within Psyr_4154 at 4941.469 kb on - strand, within Psyr_4154 at 4941.793 kb on + strand at 4941.793 kb on + strand at 4942.072 kb on + strand, within Psyr_4155 at 4942.072 kb on + strand, within Psyr_4155 at 4942.072 kb on + strand, within Psyr_4155 at 4942.072 kb on + strand, within Psyr_4155 at 4942.072 kb on + strand, within Psyr_4155 at 4942.072 kb on + strand, within Psyr_4155 at 4942.073 kb on - strand, within Psyr_4155 at 4942.073 kb on - strand, within Psyr_4155 at 4942.073 kb on - strand, within Psyr_4155 at 4942.073 kb on - strand, within Psyr_4155 at 4942.261 kb on + strand at 4942.261 kb on + strand at 4942.261 kb on + strand at 4942.261 kb on + strand at 4942.261 kb on + strand at 4942.261 kb on + strand at 4942.262 kb on - strand at 4942.262 kb on - strand at 4942.262 kb on - strand at 4942.262 kb on - strand at 4942.262 kb on - strand at 4942.262 kb on - strand at 4942.395 kb on + strand at 4942.640 kb on + strand, within Psyr_4156 at 4942.640 kb on + strand, within Psyr_4156 at 4942.640 kb on + strand, within Psyr_4156 at 4942.640 kb on + strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156 at 4942.641 kb on - strand, within Psyr_4156
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Novobiocin 7.75 ug/ml remove 4,939,344 - +0.9 4,939,344 - -0.2 4,939,344 - +1.6 4,939,425 + -0.9 4,939,425 + +0.4 4,939,426 - +1.7 4,939,426 - +0.5 4,939,426 - +0.9 4,939,426 - +0.7 4,939,503 - +0.4 4,939,863 - -0.4 4,939,977 - +0.2 4,939,977 - +0.9 4,939,977 - -0.4 4,939,977 - +0.2 4,940,090 - -0.5 4,940,121 + -0.7 4,940,517 + Psyr_4154 0.14 +0.3 4,940,518 - Psyr_4154 0.14 +0.3 4,940,685 + Psyr_4154 0.27 -1.3 4,940,685 + Psyr_4154 0.27 -2.6 4,940,686 - Psyr_4154 0.27 -0.1 4,940,686 - Psyr_4154 0.27 +0.8 4,940,686 - Psyr_4154 0.27 +0.0 4,940,700 + Psyr_4154 0.28 -0.2 4,940,700 + Psyr_4154 0.28 -0.9 4,940,700 + Psyr_4154 0.28 -0.7 4,940,700 + Psyr_4154 0.28 -2.1 4,940,701 - Psyr_4154 0.28 +0.6 4,940,701 - Psyr_4154 0.28 +1.8 4,940,701 - Psyr_4154 0.28 +0.5 4,940,701 - Psyr_4154 0.28 -0.4 4,940,701 - Psyr_4154 0.28 -1.1 4,940,701 - Psyr_4154 0.28 +0.8 4,940,701 - Psyr_4154 0.28 -1.7 4,941,061 - Psyr_4154 0.54 -0.4 4,941,066 + Psyr_4154 0.55 -2.4 4,941,196 + Psyr_4154 0.65 -0.6 4,941,468 + Psyr_4154 0.85 -0.4 4,941,469 - Psyr_4154 0.85 -0.8 4,941,793 + -0.2 4,941,793 + -0.1 4,942,072 + Psyr_4155 0.56 +0.9 4,942,072 + Psyr_4155 0.56 +1.0 4,942,072 + Psyr_4155 0.56 +0.9 4,942,072 + Psyr_4155 0.56 -0.7 4,942,072 + Psyr_4155 0.56 +1.9 4,942,072 + Psyr_4155 0.56 -0.6 4,942,073 - Psyr_4155 0.56 +0.3 4,942,073 - Psyr_4155 0.56 -0.5 4,942,073 - Psyr_4155 0.56 +0.3 4,942,073 - Psyr_4155 0.56 +0.3 4,942,261 + +0.1 4,942,261 + -1.8 4,942,261 + +0.3 4,942,261 + -1.4 4,942,261 + +0.9 4,942,261 + -0.6 4,942,262 - +0.5 4,942,262 - +0.8 4,942,262 - +0.2 4,942,262 - -1.1 4,942,262 - +0.5 4,942,262 - +0.1 4,942,395 + -1.5 4,942,640 + Psyr_4156 0.20 +0.6 4,942,640 + Psyr_4156 0.20 +1.1 4,942,640 + Psyr_4156 0.20 +0.9 4,942,640 + Psyr_4156 0.20 -0.9 4,942,641 - Psyr_4156 0.20 +1.6 4,942,641 - Psyr_4156 0.20 +2.1 4,942,641 - Psyr_4156 0.20 +0.9 4,942,641 - Psyr_4156 0.20 -0.2 4,942,641 - Psyr_4156 0.20 +0.8 4,942,641 - Psyr_4156 0.20 -0.2 4,942,641 - Psyr_4156 0.20 +0.6 4,942,641 - Psyr_4156 0.20 +0.0 4,942,641 - Psyr_4156 0.20 +0.3
Or see this region's nucleotide sequence