Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3258

Experiment: KB with Novobiocin 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 7.75 ug/ml
3,900,908	-		Psyr_3255	0.33	+0.1
3,900,940	-		Psyr_3255	0.39	+0.3
3,901,205	+				+0.5
3,901,205	+				-3.5
3,901,205	+				-0.9
3,901,205	+				+0.7
3,901,364	-		Psyr_3256	0.47	-0.3
3,901,364	-		Psyr_3256	0.47	+0.2
3,901,369	-		Psyr_3256	0.48	+1.6
3,901,369	-		Psyr_3256	0.48	-0.8
3,901,420	+		Psyr_3256	0.67	-0.3
3,901,420	+		Psyr_3256	0.67	+0.7
3,901,420	+		Psyr_3256	0.67	+2.7
3,901,421	-		Psyr_3256	0.67	-1.3
3,901,421	-		Psyr_3256	0.67	+0.2
3,901,526	+				-0.2
3,901,526	+				-0.8
3,901,526	+				+1.0
3,901,526	+				-0.8
3,901,549	+		Psyr_3257	0.10	-0.2
3,901,701	+		Psyr_3257	0.50	-2.6
3,901,701	+		Psyr_3257	0.50	+0.1
3,901,701	+		Psyr_3257	0.50	-0.4
3,901,702	-		Psyr_3257	0.51	+1.4
3,901,702	-		Psyr_3257	0.51	-1.4
3,901,702	-		Psyr_3257	0.51	+0.8
3,901,910	-				+0.5
3,902,194	-		Psyr_3258	0.61	+1.6
3,902,254	+		Psyr_3258	0.74	-3.6
3,902,254	+		Psyr_3258	0.74	-0.5
3,902,254	+		Psyr_3258	0.74	-0.6
3,902,254	+		Psyr_3258	0.74	+2.1
3,902,254	+		Psyr_3258	0.74	-2.0
3,902,254	+		Psyr_3258	0.74	-2.6
3,902,255	-		Psyr_3258	0.74	+0.5
3,902,255	-		Psyr_3258	0.74	+0.3
3,902,255	-		Psyr_3258	0.74	-1.7
3,902,363	+				+0.9
3,902,363	+				+1.1
3,902,364	-				-0.7
3,902,367	+				-1.7
3,902,378	+				-0.5
3,902,378	+				-0.9
3,902,379	-				-2.3
3,902,443	+				-0.3
3,902,563	-				+1.0
3,902,564	+				-1.7
3,902,564	+				-1.3
3,902,564	+				-1.4
3,902,564	+				-0.1
3,902,565	-				+0.2
3,902,565	-				+0.1
3,902,565	-				+0.2
3,902,565	-				-1.5
3,902,565	-				-0.2
3,902,691	+				-0.1
3,902,691	+				+0.4
3,902,691	+				-2.2
3,902,691	+				+0.4
3,902,692	-				+0.9
3,902,692	-				-0.3
3,902,698	+				+0.6
3,902,698	+				+2.3
3,902,698	+				-0.6
3,902,699	-				-1.6
3,902,699	-				-0.2
3,902,699	-				-0.4
3,902,699	-				+0.0
3,902,699	-				+0.6
3,902,699	-				+1.1
3,902,699	-				+0.5
3,902,775	+				+0.4
3,902,798	-				+0.2
3,902,830	+				+0.0
3,902,830	+				-0.5
3,902,831	-				+2.3
3,902,831	-				+0.6
3,902,831	-				+0.7
3,902,836	+				+0.1
3,902,836	+				-0.4
3,902,837	-				+0.5
3,903,184	-				-0.5
3,903,184	-				-0.4
3,903,184	-				-1.6
3,903,184	-				+0.9
3,903,214	+				-0.2
3,903,214	+				-1.9
3,903,215	-				+0.8
3,903,215	-				-2.0
3,903,228	+		Psyr_3260	0.10	-1.6
3,903,229	-		Psyr_3260	0.10	+0.2
3,903,229	-		Psyr_3260	0.10	-0.3