Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1344

Experiment: KB with Novobiocin 7.75 ug/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsyr_1343 and Psyr_1344 are separated by 190 nucleotidesPsyr_1344 and Psyr_1345 are separated by 205 nucleotidesPsyr_1345 and Psyr_1346 overlap by 1 nucleotides Psyr_1343: Psyr_1343 - SSU ribosomal protein S2P, at 1,523,217 to 1,523,960 _1343 Psyr_1344: Psyr_1344 - translation elongation factor Ts (EF-Ts), at 1,524,151 to 1,525,014 _1344 Psyr_1345: Psyr_1345 - uridylate kinase, at 1,525,220 to 1,525,960 _1345 Psyr_1346: Psyr_1346 - ribosome recycling factor, at 1,525,960 to 1,526,517 _1346 Position (kb) 1524 1525 1526Strain fitness (log2 ratio) -1 0 1at 1524.022 kb on + strandat 1524.022 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction KB with Novobiocin 7.75 ug/ml
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1,524,022 + -0.1
1,524,022 + +0.6

Or see this region's nucleotide sequence