Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0736

Experiment: KB with Novobiocin 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Novobiocin 7.75 ug/ml
839,992	-		Psyr_0734	0.70	+0.2
839,992	-		Psyr_0734	0.70	-0.8
839,992	-		Psyr_0734	0.70	+0.8
839,997	+		Psyr_0734	0.71	-0.8
840,012	-		Psyr_0734	0.75	+0.5
840,012	-		Psyr_0734	0.75	-0.7
840,012	-		Psyr_0734	0.75	-0.1
840,266	+				-1.5
840,283	+				-0.8
840,283	+				-0.4
840,283	+				-0.5
840,283	+				-0.9
840,283	+				-0.7
840,284	-				+0.2
840,351	-				+2.6
840,351	-				+0.5
840,448	+				+0.2
840,452	+				+1.1
840,452	+				+0.1
840,454	+				-0.8
840,456	+				+0.8
840,456	+				-0.6
840,456	+				-0.2
840,456	+				-1.0
840,495	-				-0.0
840,495	-				+0.0
840,495	-				-0.1
840,495	-				+1.5
840,495	-				+0.3
840,495	-				+0.3
840,762	+		Psyr_0735	0.63	-1.6
840,762	+		Psyr_0735	0.63	-0.4
840,762	+		Psyr_0735	0.63	-0.5
840,762	+		Psyr_0735	0.63	-0.0
840,762	+		Psyr_0735	0.63	+1.0
840,829	-		Psyr_0735	0.79	-0.9
840,829	-		Psyr_0735	0.79	-1.5
840,892	+				-0.7
840,892	+				-1.5
840,892	+				-1.6
840,892	+				+0.1
840,892	+				+1.0
840,892	+				-0.7
840,957	-		Psyr_0736	0.20	-1.2
840,957	-		Psyr_0736	0.20	-0.5
840,957	-		Psyr_0736	0.20	+0.0
841,142	+				+1.6
841,142	+				-0.2
841,151	+				-0.7
841,151	+				-0.5
841,152	-				+2.4
841,154	+				+0.6
841,154	+				+1.4
841,154	+				-0.9
841,155	-				-0.2
841,159	+				-0.6
841,159	+				+0.4
841,159	+				+0.4
841,159	+				-0.4
841,159	+				-0.3
841,160	-				-0.1
841,160	-				-0.2
841,223	+				+0.1
841,223	+				+0.6
841,223	+				+0.4
841,223	+				-2.9
841,223	+				-2.5
841,223	+				-1.8
841,224	-				+0.3
841,224	-				-0.4
841,353	-				-0.2
841,487	-		Psyr_0737	0.29	+0.3
841,489	+		Psyr_0737	0.29	-1.8
841,519	+		Psyr_0737	0.37	-1.5
841,544	+		Psyr_0737	0.43	-0.4
841,544	+		Psyr_0737	0.43	-0.5
841,544	+		Psyr_0737	0.43	-0.4
841,545	-		Psyr_0737	0.43	+0.1
841,545	-		Psyr_0737	0.43	-1.0
841,545	-		Psyr_0737	0.43	-2.0
841,545	-		Psyr_0737	0.43	+0.0
841,547	-		Psyr_0737	0.43	+0.8
841,570	+		Psyr_0737	0.49	+0.4
841,570	+		Psyr_0737	0.49	-1.9
841,570	+		Psyr_0737	0.49	-0.2
841,571	-		Psyr_0737	0.49	-0.5
841,571	-		Psyr_0737	0.49	+0.2
841,574	+		Psyr_0737	0.50	-0.3
841,574	+		Psyr_0737	0.50	-1.5
841,575	-		Psyr_0737	0.50	+0.5
841,575	-		Psyr_0737	0.50	-1.1
841,642	-		Psyr_0737	0.66	-0.2
841,706	-		Psyr_0737	0.82	+0.3
841,717	-		Psyr_0737	0.85	+1.4
841,803	+				-0.7
841,803	+				-1.9
841,804	-				-1.2
841,804	-				-0.9
841,854	+				-1.2
841,881	-				-0.9
841,881	-				-2.3
841,881	-				+0.4
841,894	+				-0.7
841,895	-				-0.3
841,895	-				+0.4
842,014	+				+0.6
842,015	-				-0.4
842,015	-				-0.5