Strain Fitness in Agrobacterium fabrum C58 around Atu3716

Experiment: 4-Hydroxybenzoic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAtu3715 and Atu3716 are separated by 9 nucleotidesAtu3716 and Atu3717 are separated by 58 nucleotides Atu3715: Atu3715 - hypothetical protein, at 797,692 to 798,846 Atu3715 Atu3716: Atu3716 - tolR protein, at 798,856 to 799,314 Atu3716 Atu3717: Atu3717 - tolQ protein, at 799,373 to 800,092 Atu3717 Position (kb) 798 799 800Strain fitness (log2 ratio) -1 0 1at 800.295 kb on + strandat 800.305 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C)
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800,295 + +0.1
800,305 + +1.6

Or see this region's nucleotide sequence