Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2505

Experiment: KB with Benzalkonium chloride 1.55 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium chloride 1.55 ug/ml
2,913,654	-		Psyr_2503	0.73	+2.5
2,913,654	-		Psyr_2503	0.73	+1.2
2,913,716	+		Psyr_2503	0.80	+1.2
2,913,716	+		Psyr_2503	0.80	+0.8
2,913,716	+		Psyr_2503	0.80	-0.4
2,913,717	-		Psyr_2503	0.80	-0.4
2,913,785	-		Psyr_2503	0.88	-0.1
2,913,878	+				+1.2
2,913,879	-				+0.0
2,913,879	-				-0.9
2,913,884	+				-0.0
2,913,885	-				-0.5
2,913,885	-				+0.3
2,913,885	-				-0.5
2,913,885	-				-1.7
2,913,957	-				-1.1
2,914,097	+		Psyr_2504	0.22	-0.6
2,914,128	-		Psyr_2504	0.27	-1.0
2,914,259	+		Psyr_2504	0.47	-1.6
2,914,272	+		Psyr_2504	0.49	-0.6
2,914,273	-		Psyr_2504	0.49	-1.2
2,914,273	-		Psyr_2504	0.49	+0.6
2,914,358	+		Psyr_2504	0.62	-0.0
2,914,358	+		Psyr_2504	0.62	+2.2
2,914,358	+		Psyr_2504	0.62	+0.5
2,914,359	-		Psyr_2504	0.62	-0.4
2,914,359	-		Psyr_2504	0.62	-2.5
2,914,359	-		Psyr_2504	0.62	+0.2
2,914,359	-		Psyr_2504	0.62	-0.8
2,914,360	+		Psyr_2504	0.62	-0.9
2,914,360	+		Psyr_2504	0.62	-0.0
2,914,360	+		Psyr_2504	0.62	+1.0
2,914,360	+		Psyr_2504	0.62	+0.4
2,914,361	-		Psyr_2504	0.62	-1.6
2,914,389	+		Psyr_2504	0.66	+0.3
2,914,389	+		Psyr_2504	0.66	-1.0
2,914,390	-		Psyr_2504	0.66	+1.0
2,914,390	-		Psyr_2504	0.66	-0.4
2,914,472	+		Psyr_2504	0.79	-0.0
2,914,472	+		Psyr_2504	0.79	+2.2
2,914,472	+		Psyr_2504	0.79	+0.3
2,914,472	+		Psyr_2504	0.79	+1.5
2,914,473	-		Psyr_2504	0.79	-1.4
2,914,473	-		Psyr_2504	0.79	+1.0
2,914,473	-		Psyr_2504	0.79	-2.6
2,914,473	-		Psyr_2504	0.79	+0.2
2,914,476	-		Psyr_2504	0.79	+0.4
2,914,541	+		Psyr_2504	0.89	-0.9
2,914,541	+		Psyr_2504	0.89	-0.9
2,914,541	+		Psyr_2504	0.89	+0.5
2,914,541	+		Psyr_2504	0.89	+0.4
2,914,542	-		Psyr_2504	0.89	+0.1
2,914,542	-		Psyr_2504	0.89	-0.4
2,914,542	-		Psyr_2504	0.89	-0.0
2,914,542	-		Psyr_2504	0.89	+1.2
2,914,542	-		Psyr_2504	0.89	+0.9
2,914,542	-		Psyr_2504	0.89	-0.9
2,914,542	-		Psyr_2504	0.89	+0.1
2,914,556	+				+0.2
2,914,557	-				-3.6
2,914,625	+				+0.9
2,914,625	+				-0.3
2,914,625	+				+0.5
2,914,625	+				+1.1
2,914,625	+				-0.4
2,914,625	+				-0.9
2,914,626	-				-1.0
2,914,626	-				-0.5
2,914,626	-				+1.4
2,914,766	+		Psyr_2505	0.22	+1.4
2,914,802	+		Psyr_2505	0.27	+0.6
2,914,803	-		Psyr_2505	0.27	-0.4
2,914,803	-		Psyr_2505	0.27	+0.0
2,914,803	-		Psyr_2505	0.27	-1.4
2,914,856	+		Psyr_2505	0.35	-1.0
2,914,856	+		Psyr_2505	0.35	-1.9
2,914,856	+		Psyr_2505	0.35	-1.1
2,914,856	+		Psyr_2505	0.35	+0.1
2,914,856	+		Psyr_2505	0.35	-0.9
2,914,856	+		Psyr_2505	0.35	+1.1
2,914,857	-		Psyr_2505	0.35	-0.1
2,914,857	-		Psyr_2505	0.35	+0.5
2,914,857	-		Psyr_2505	0.35	-0.0
2,914,857	-		Psyr_2505	0.35	+0.8
2,914,858	+		Psyr_2505	0.36	+0.3
2,914,858	+		Psyr_2505	0.36	+1.5
2,914,858	+		Psyr_2505	0.36	-0.6
2,914,859	-		Psyr_2505	0.36	+0.2
2,914,908	+		Psyr_2505	0.43	+0.9
2,914,909	-		Psyr_2505	0.43	+0.0
2,915,034	-		Psyr_2505	0.62	+0.6
2,915,179	+		Psyr_2505	0.84	-1.4
2,915,180	-		Psyr_2505	0.84	+1.2
2,915,231	+				-0.4
2,915,231	+				+0.8
2,915,232	-				-0.3
2,915,232	-				+1.7
2,915,295	+				+0.0
2,915,334	+				+0.9
2,915,335	-				+0.8
2,915,335	-				-0.1
2,915,519	+		Psyr_2506	0.30	-1.5
2,915,519	+		Psyr_2506	0.30	-0.0
2,915,519	+		Psyr_2506	0.30	+0.9
2,916,112	+				+0.0
2,916,112	+				+1.7
2,916,113	-				+3.2
2,916,213	+		Psyr_2507	0.32	+0.6