Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1948

Experiment: KB with Benzalkonium chloride 1.55 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium chloride 1.55 ug/ml
2,232,390	+				+1.1
2,232,391	-				+1.4
2,232,391	-				-0.5
2,232,391	-				-1.0
2,232,391	-				+1.7
2,232,483	+		Psyr_1947	0.20	+0.4
2,232,503	+		Psyr_1947	0.29	-0.5
2,232,504	-		Psyr_1947	0.29	+2.8
2,232,504	-		Psyr_1947	0.29	+0.6
2,232,521	+		Psyr_1947	0.37	-0.3
2,232,522	-		Psyr_1947	0.37	-0.5
2,232,587	+		Psyr_1947	0.67	+0.3
2,232,588	-		Psyr_1947	0.68	-0.3
2,232,588	-		Psyr_1947	0.68	-1.2
2,232,800	+				-1.1
2,233,747	-		Psyr_1948	0.39	-0.7
2,233,967	+		Psyr_1948	0.63	-0.5
2,234,087	-		Psyr_1948	0.76	+0.1
2,234,161	-		Psyr_1948	0.84	-1.5
2,234,176	+		Psyr_1948	0.86	-0.5
2,234,177	-		Psyr_1948	0.86	+0.8
2,234,177	-		Psyr_1948	0.86	+0.0
2,234,291	+				-0.9
2,234,292	-				+0.6
2,234,295	+				+0.2
2,234,295	+				+0.6
2,234,296	-				+1.6
2,234,296	-				-1.0
2,234,689	+		Psyr_1949	0.42	-0.6
2,234,689	+		Psyr_1949	0.42	-0.6
2,234,911	+		Psyr_1949	0.67	+0.8
2,234,911	+		Psyr_1949	0.67	-0.6
2,234,959	+		Psyr_1949	0.72	-1.2
2,235,200	-				-0.1