Strain Fitness in Pseudomonas simiae WCS417 around PS417_03755

Experiment: root sample 6; outgrowth in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPS417_03750 and PS417_03755 are separated by 119 nucleotidesPS417_03755 and PS417_03760 are separated by 14 nucleotides PS417_03750: PS417_03750 - membrane protein, at 848,514 to 850,052 _03750 PS417_03755: PS417_03755 - FMN adenylyltransferase, at 850,172 to 851,110 _03755 PS417_03760: PS417_03760 - isoleucine--tRNA ligase, at 851,125 to 853,956 _03760 Position (kb) 850 851 852Strain fitness (log2 ratio) -3 -2 -1 0 1at 850.153 kb on + strandat 850.153 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction root sample 6; outgrowth in LB
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850,153 + -0.2
850,153 + -2.9

Or see this region's nucleotide sequence