Strain Fitness in Escherichia coli BW25113 around b0045

Experiment: LB Aerobic with Spiramycin 0.000125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Aerobic with Spiramycin 0.000125 mM
44,857	-	fixC	b0043	0.53	-0.8
44,862	-	fixC	b0043	0.53	+0.2
44,906	-	fixC	b0043	0.56	+1.2
45,034	+	fixC	b0043	0.66	+0.5
45,034	+	fixC	b0043	0.66	-2.0
45,044	+	fixC	b0043	0.67	-0.4
45,044	+	fixC	b0043	0.67	+0.5
45,232	+	fixC	b0043	0.82	-0.4
45,241	-	fixC	b0043	0.82	-0.9
45,323	-	fixC	b0043	0.89	+0.6
45,339	+				+0.6
45,339	+				+0.2
45,340	-				-0.9
45,426	+				-1.9
45,546	-	fixX	b0044	0.29	-0.3
45,610	+	fixX	b0044	0.51	-0.9
45,700	-	fixX	b0044	0.82	-0.6
45,704	+	fixX	b0044	0.84	-0.6
45,704	+	fixX	b0044	0.84	+0.6
45,844	+				-0.8
45,880	-				-2.8
45,924	+				-0.8
46,113	+	yaaU	b0045	0.23	-0.1
46,113	+	yaaU	b0045	0.23	-0.1
46,142	-	yaaU	b0045	0.25	+0.6
46,144	-	yaaU	b0045	0.25	+0.4
46,176	-	yaaU	b0045	0.28	+1.1
46,176	-	yaaU	b0045	0.28	+0.9
46,240	+	yaaU	b0045	0.33	-0.1
46,284	-	yaaU	b0045	0.36	+0.6
46,329	+	yaaU	b0045	0.39	+0.6
46,329	+	yaaU	b0045	0.39	+0.0
46,463	+	yaaU	b0045	0.49	+0.1
46,463	+	yaaU	b0045	0.49	+0.9
46,564	+	yaaU	b0045	0.57	+0.2
46,564	+	yaaU	b0045	0.57	+1.2
46,575	+	yaaU	b0045	0.58	-0.4
46,707	-	yaaU	b0045	0.68	+0.1
46,707	-	yaaU	b0045	0.68	+1.3
46,800	+	yaaU	b0045	0.75	+0.9
46,920	-	yaaU	b0045	0.84	+0.5
47,003	+	yaaU	b0045	0.90	-0.3
47,067	+				-0.0
47,097	-				+0.3
47,097	-				-2.0
47,113	-				+0.6
47,113	-				+0.1
47,202	-				+1.9
47,225	+				+0.1
47,225	+				+0.7
47,247	-				+1.0
47,269	+				-0.2
47,359	-	kefF	b0046	0.21	+0.0
47,364	-	kefF	b0046	0.22	+0.9
47,364	-	kefF	b0046	0.22	+0.3
47,364	-	kefF	b0046	0.22	-0.3
47,364	-	kefF	b0046	0.22	+0.1
47,402	-	kefF	b0046	0.29	-0.1
47,412	-	kefF	b0046	0.31	-0.3
47,446	+	kefF	b0046	0.38	+0.0
47,454	+	kefF	b0046	0.39	+0.6
47,503	+	kefF	b0046	0.48	-0.3
47,504	+	kefF	b0046	0.49	-0.3
47,504	+	kefF	b0046	0.49	-0.7
47,639	+	kefF	b0046	0.74	-0.9
47,651	+	kefF	b0046	0.76	+0.1
47,675	+	kefF	b0046	0.81	-0.0
47,681	+	kefF	b0046	0.82	-0.4
47,681	+	kefF	b0046	0.82	-2.0
47,730	+				-0.1
47,762	+				-0.5
47,774	-				-0.4
47,784	-				-1.3
47,823	+				-0.2
47,823	+				+0.2
47,832	+				+0.0
47,832	+				+0.1
47,836	+				+0.3
47,848	+				-0.1
47,859	+				+0.7
47,921	+				-0.0
47,948	+				-1.6
47,948	+				-0.4
47,958	+	kefC	b0047	0.10	-0.2
47,958	+	kefC	b0047	0.10	-0.8
47,977	-	kefC	b0047	0.11	-0.4
48,009	-	kefC	b0047	0.13	+0.1
48,009	-	kefC	b0047	0.13	-1.8
48,009	-	kefC	b0047	0.13	+0.7
48,031	+	kefC	b0047	0.14	+0.3