Strain Fitness in Escherichia coli BW25113 around b4155
Experiment: LB Aerobic with Phenazine ethosulfate 0.0000625 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB Aerobic with Phenazine ethosulfate 0.0000625 mM |
---|---|---|---|---|---|
remove | |||||
4,379,672 | + | frdA | b4154 | 0.63 | -0.9 |
4,379,672 | + | frdA | b4154 | 0.63 | -0.1 |
4,379,698 | - | frdA | b4154 | 0.64 | +0.7 |
4,379,698 | - | frdA | b4154 | 0.64 | -0.5 |
4,379,719 | + | frdA | b4154 | 0.66 | +0.6 |
4,379,719 | + | frdA | b4154 | 0.66 | -2.3 |
4,379,803 | - | frdA | b4154 | 0.70 | +0.4 |
4,379,822 | + | frdA | b4154 | 0.71 | -0.1 |
4,379,824 | - | frdA | b4154 | 0.71 | +0.4 |
4,379,824 | - | frdA | b4154 | 0.71 | +0.8 |
4,379,858 | + | frdA | b4154 | 0.73 | +1.0 |
4,379,941 | - | frdA | b4154 | 0.78 | +0.2 |
4,379,970 | - | frdA | b4154 | 0.79 | -0.3 |
4,380,036 | - | frdA | b4154 | 0.83 | -0.4 |
4,380,055 | - | frdA | b4154 | 0.84 | +0.6 |
4,380,072 | + | frdA | b4154 | 0.85 | +0.2 |
4,380,083 | - | frdA | b4154 | 0.86 | -0.6 |
4,380,102 | - | frdA | b4154 | 0.87 | -0.1 |
4,380,124 | + | frdA | b4154 | 0.88 | +0.6 |
4,380,159 | + | frdA | b4154 | 0.90 | +0.5 |
4,380,159 | + | frdA | b4154 | 0.90 | -0.4 |
4,380,159 | + | frdA | b4154 | 0.90 | +0.2 |
4,380,165 | + | +0.6 | |||
4,380,165 | + | +0.8 | |||
4,380,197 | - | -0.5 | |||
4,380,205 | + | -0.5 | |||
4,380,211 | - | -0.4 | |||
4,380,306 | - | -0.6 | |||
4,380,380 | + | +0.5 | |||
4,380,440 | + | +0.7 | |||
4,380,441 | - | -0.3 | |||
4,380,443 | + | -0.7 | |||
4,380,448 | + | -0.8 | |||
4,380,451 | - | -1.2 | |||
4,380,451 | - | -0.2 | |||
4,380,451 | - | +0.3 | |||
4,380,581 | - | -0.1 | |||
4,380,581 | - | +0.5 | |||
4,381,607 | + | +2.2 | |||
4,381,666 | - | -0.4 | |||
4,381,690 | + | -0.0 | |||
4,381,764 | + | -1.2 | |||
4,381,785 | + | -1.8 | |||
4,381,787 | - | +0.2 | |||
4,381,791 | + | -1.3 | |||
4,381,795 | + | -2.4 | |||
4,381,795 | + | -1.0 | |||
4,381,795 | + | -0.6 | |||
4,381,795 | + | -1.2 | |||
4,381,800 | + | -1.2 | |||
4,381,800 | + | -2.2 | |||
4,381,800 | + | +0.1 | |||
4,381,800 | + | -1.3 | |||
4,381,800 | + | -1.4 | |||
4,381,800 | + | -0.7 | |||
4,381,800 | + | -1.7 | |||
4,381,800 | + | -1.7 | |||
4,381,802 | + | -1.7 | |||
4,381,802 | + | -0.9 | |||
4,381,803 | - | -1.5 | |||
4,381,803 | - | +0.8 | |||
4,381,803 | - | +0.3 | |||
4,381,803 | - | -0.5 | |||
4,381,803 | - | +0.9 | |||
4,381,805 | + | -0.5 | |||
4,381,805 | + | -1.0 | |||
4,381,807 | + | -4.0 | |||
4,381,807 | + | -1.6 | |||
4,381,808 | - | -1.7 | |||
4,381,810 | + | -0.3 | |||
4,381,810 | + | -0.6 | |||
4,381,810 | + | -1.2 | |||
4,381,810 | + | -1.5 | |||
4,381,810 | + | -2.0 | |||
4,381,810 | + | -0.8 | |||
4,381,810 | + | -0.6 | |||
4,381,810 | + | -0.6 | |||
4,381,810 | + | -0.8 | |||
4,381,810 | + | -1.1 | |||
4,381,810 | + | -1.9 | |||
4,381,815 | + | -1.7 | |||
4,381,815 | + | -1.3 | |||
4,381,815 | + | -2.2 | |||
4,381,815 | + | -1.8 | |||
4,381,815 | + | -1.3 | |||
4,381,816 | - | -0.4 | |||
4,381,816 | - | +0.6 | |||
4,381,818 | - | -0.4 | |||
4,381,818 | - | +0.6 | |||
4,381,818 | - | +0.6 | |||
4,381,818 | - | +2.2 | |||
4,381,818 | - | +0.6 | |||
4,381,818 | - | -0.6 | |||
4,381,820 | + | -1.2 | |||
4,381,820 | + | -1.4 | |||
4,381,823 | + | -1.6 | |||
4,381,828 | + | +0.2 | |||
4,381,828 | + | -2.0 | |||
4,381,828 | + | -2.7 | |||
4,381,828 | + | -1.2 | |||
4,381,828 | + | -1.5 | |||
4,381,828 | + | -0.9 | |||
4,381,828 | + | -0.9 | |||
4,381,828 | + | -1.3 | |||
4,381,830 | + | -1.0 | |||
4,381,830 | + | -2.1 | |||
4,381,830 | + | -0.1 | |||
4,381,830 | + | -1.3 | |||
4,381,830 | + | -1.5 | |||
4,381,831 | + | -1.6 | |||
4,381,838 | - | -0.4 | |||
4,381,852 | - | +2.2 | |||
4,381,855 | + | -0.2 | |||
4,381,857 | + | +0.3 | |||
4,381,857 | + | -0.6 | |||
4,381,857 | + | -1.0 | |||
4,381,864 | + | -1.7 | |||
4,381,867 | + | +0.4 | |||
4,381,887 | + | +0.4 | |||
4,381,887 | + | -0.6 | |||
4,381,887 | + | -0.2 | |||
4,381,887 | + | +0.1 | |||
4,381,887 | + | +0.1 | |||
4,381,887 | + | +0.3 | |||
4,381,890 | + | +0.1 | |||
4,381,890 | + | -0.9 | |||
4,381,890 | + | -0.1 | |||
4,381,891 | + | -2.2 | |||
4,381,891 | + | +0.6 | |||
4,381,891 | + | +1.5 | |||
4,381,896 | + | -0.0 | |||
4,381,896 | + | +0.5 | |||
4,381,900 | + | -0.8 | |||
4,381,900 | + | +0.0 | |||
4,381,901 | + | +0.1 | |||
4,381,910 | + | +1.1 | |||
4,381,910 | + | -0.0 | |||
4,381,912 | + | +0.3 | |||
4,381,912 | + | +0.9 | |||
4,381,933 | + | -0.2 | |||
4,381,934 | + | -1.1 | |||
4,381,944 | + | +0.4 | |||
4,381,957 | + | +2.8 | |||
4,381,957 | + | +0.0 | |||
4,381,961 | + | -0.1 | |||
4,382,015 | + | yjeM | b4156 | 0.10 | +1.2 |
4,382,022 | + | yjeM | b4156 | 0.11 | +0.2 |
4,382,022 | + | yjeM | b4156 | 0.11 | +0.2 |
4,382,029 | - | yjeM | b4156 | 0.11 | +0.1 |
4,382,030 | - | yjeM | b4156 | 0.11 | +0.2 |
4,382,036 | + | yjeM | b4156 | 0.12 | +1.2 |
4,382,036 | + | yjeM | b4156 | 0.12 | -0.1 |
4,382,036 | + | yjeM | b4156 | 0.12 | -0.4 |
4,382,038 | + | yjeM | b4156 | 0.12 | -0.6 |
4,382,045 | + | yjeM | b4156 | 0.12 | +1.2 |
4,382,048 | + | yjeM | b4156 | 0.12 | +0.6 |
4,382,048 | + | yjeM | b4156 | 0.12 | -0.9 |
4,382,048 | + | yjeM | b4156 | 0.12 | +0.1 |
4,382,048 | + | yjeM | b4156 | 0.12 | +1.8 |
4,382,048 | + | yjeM | b4156 | 0.12 | -0.6 |
4,382,048 | + | yjeM | b4156 | 0.12 | +1.8 |
4,382,053 | - | yjeM | b4156 | 0.13 | +1.1 |
4,382,056 | - | yjeM | b4156 | 0.13 | +0.2 |
4,382,056 | - | yjeM | b4156 | 0.13 | -0.1 |
4,382,056 | - | yjeM | b4156 | 0.13 | -1.6 |
4,382,056 | - | yjeM | b4156 | 0.13 | +1.2 |
4,382,056 | - | yjeM | b4156 | 0.13 | -0.4 |
4,382,068 | - | yjeM | b4156 | 0.14 | +2.2 |
4,382,068 | - | yjeM | b4156 | 0.14 | +1.2 |
4,382,076 | + | yjeM | b4156 | 0.14 | -0.6 |
4,382,076 | + | yjeM | b4156 | 0.14 | -0.7 |
4,382,078 | - | yjeM | b4156 | 0.14 | -0.8 |
4,382,078 | - | yjeM | b4156 | 0.14 | +1.2 |
4,382,099 | - | yjeM | b4156 | 0.16 | -0.4 |
4,382,102 | - | yjeM | b4156 | 0.16 | -0.1 |
4,382,111 | + | yjeM | b4156 | 0.17 | +0.6 |
4,382,114 | - | yjeM | b4156 | 0.17 | -0.9 |
4,382,119 | - | yjeM | b4156 | 0.17 | +0.5 |
4,382,125 | - | yjeM | b4156 | 0.17 | +0.2 |
4,382,128 | - | yjeM | b4156 | 0.18 | -0.4 |
4,382,128 | - | yjeM | b4156 | 0.18 | +3.2 |
4,382,134 | - | yjeM | b4156 | 0.18 | +1.0 |
4,382,148 | - | yjeM | b4156 | 0.19 | +0.6 |
4,382,148 | - | yjeM | b4156 | 0.19 | -0.1 |
4,382,148 | - | yjeM | b4156 | 0.19 | +1.2 |
4,382,148 | - | yjeM | b4156 | 0.19 | +0.2 |
4,382,148 | - | yjeM | b4156 | 0.19 | +1.2 |
4,382,149 | + | yjeM | b4156 | 0.19 | +1.2 |
4,382,151 | + | yjeM | b4156 | 0.19 | +0.2 |
4,382,157 | - | yjeM | b4156 | 0.20 | -0.2 |
4,382,157 | - | yjeM | b4156 | 0.20 | -0.5 |
4,382,157 | - | yjeM | b4156 | 0.20 | -1.1 |
4,382,159 | + | yjeM | b4156 | 0.20 | +2.2 |
4,382,159 | + | yjeM | b4156 | 0.20 | +0.2 |
4,382,159 | + | yjeM | b4156 | 0.20 | +1.2 |
4,382,159 | + | yjeM | b4156 | 0.20 | +1.2 |
4,382,159 | + | yjeM | b4156 | 0.20 | +2.2 |
4,382,159 | - | yjeM | b4156 | 0.20 | +3.2 |
4,382,161 | + | yjeM | b4156 | 0.20 | -0.4 |
4,382,167 | - | yjeM | b4156 | 0.20 | +0.2 |
4,382,167 | - | yjeM | b4156 | 0.20 | -0.5 |
4,382,167 | - | yjeM | b4156 | 0.20 | +1.6 |
4,382,167 | - | yjeM | b4156 | 0.20 | +0.5 |
4,382,176 | + | yjeM | b4156 | 0.21 | -0.0 |
4,382,177 | - | yjeM | b4156 | 0.21 | -0.1 |
4,382,190 | + | yjeM | b4156 | 0.22 | -0.1 |
4,382,193 | + | yjeM | b4156 | 0.22 | +0.6 |
4,382,193 | + | yjeM | b4156 | 0.22 | +1.2 |
4,382,196 | - | yjeM | b4156 | 0.22 | -0.1 |
4,382,198 | + | yjeM | b4156 | 0.22 | -0.7 |
4,382,198 | + | yjeM | b4156 | 0.22 | +0.9 |
4,382,200 | + | yjeM | b4156 | 0.22 | +0.9 |
4,382,201 | + | yjeM | b4156 | 0.23 | +1.0 |
4,382,201 | + | yjeM | b4156 | 0.23 | -0.9 |
4,382,203 | - | yjeM | b4156 | 0.23 | -0.4 |
4,382,205 | + | yjeM | b4156 | 0.23 | -1.1 |
4,382,206 | - | yjeM | b4156 | 0.23 | +1.4 |
4,382,209 | - | yjeM | b4156 | 0.23 | -1.0 |
4,382,211 | - | yjeM | b4156 | 0.23 | -0.6 |
4,382,211 | - | yjeM | b4156 | 0.23 | -0.4 |
4,382,217 | + | yjeM | b4156 | 0.24 | -0.8 |
4,382,217 | + | yjeM | b4156 | 0.24 | +0.4 |
4,382,219 | + | yjeM | b4156 | 0.24 | +0.2 |
4,382,219 | + | yjeM | b4156 | 0.24 | -1.3 |
4,382,220 | - | yjeM | b4156 | 0.24 | +0.6 |
4,382,224 | + | yjeM | b4156 | 0.24 | -0.1 |
4,382,227 | - | yjeM | b4156 | 0.24 | +0.9 |
4,382,227 | - | yjeM | b4156 | 0.24 | -0.6 |
4,382,227 | - | yjeM | b4156 | 0.24 | +1.2 |
4,382,227 | - | yjeM | b4156 | 0.24 | +1.2 |
4,382,227 | - | yjeM | b4156 | 0.24 | +2.2 |
4,382,235 | + | yjeM | b4156 | 0.25 | -0.3 |
4,382,243 | - | yjeM | b4156 | 0.25 | +0.2 |
4,382,250 | - | yjeM | b4156 | 0.26 | -0.1 |
4,382,255 | - | yjeM | b4156 | 0.26 | +0.9 |
4,382,255 | - | yjeM | b4156 | 0.26 | +1.9 |
4,382,262 | - | yjeM | b4156 | 0.27 | +0.6 |
4,382,265 | - | yjeM | b4156 | 0.27 | +2.2 |
4,382,268 | + | yjeM | b4156 | 0.27 | +0.6 |
4,382,269 | + | yjeM | b4156 | 0.27 | -0.5 |
4,382,272 | + | yjeM | b4156 | 0.27 | +0.4 |
4,382,273 | - | yjeM | b4156 | 0.27 | +0.6 |
4,382,273 | - | yjeM | b4156 | 0.27 | -0.4 |
4,382,274 | + | yjeM | b4156 | 0.27 | -0.7 |
4,382,275 | - | yjeM | b4156 | 0.27 | +2.2 |
4,382,278 | + | yjeM | b4156 | 0.28 | +0.4 |
4,382,283 | + | yjeM | b4156 | 0.28 | +0.6 |
4,382,283 | + | yjeM | b4156 | 0.28 | +0.0 |
4,382,286 | + | yjeM | b4156 | 0.28 | +0.2 |
4,382,286 | + | yjeM | b4156 | 0.28 | +0.6 |
4,382,288 | + | yjeM | b4156 | 0.28 | +0.5 |
4,382,288 | + | yjeM | b4156 | 0.28 | -0.1 |
4,382,288 | + | yjeM | b4156 | 0.28 | -0.2 |
4,382,288 | + | yjeM | b4156 | 0.28 | +0.2 |
4,382,288 | + | yjeM | b4156 | 0.28 | +0.2 |
4,382,288 | + | yjeM | b4156 | 0.28 | -0.3 |
4,382,288 | + | yjeM | b4156 | 0.28 | -0.1 |
4,382,296 | - | yjeM | b4156 | 0.29 | +2.2 |
4,382,296 | - | yjeM | b4156 | 0.29 | +2.2 |
4,382,296 | - | yjeM | b4156 | 0.29 | +2.2 |
4,382,300 | + | yjeM | b4156 | 0.29 | +1.7 |
4,382,307 | + | yjeM | b4156 | 0.30 | -0.4 |
4,382,314 | - | yjeM | b4156 | 0.30 | +1.2 |
4,382,315 | - | yjeM | b4156 | 0.30 | +2.2 |
4,382,334 | + | yjeM | b4156 | 0.31 | +0.5 |
4,382,334 | + | yjeM | b4156 | 0.31 | +0.5 |
4,382,335 | + | yjeM | b4156 | 0.31 | -1.0 |
4,382,337 | + | yjeM | b4156 | 0.32 | -0.1 |
4,382,337 | + | yjeM | b4156 | 0.32 | +0.9 |
4,382,337 | + | yjeM | b4156 | 0.32 | -0.6 |
4,382,345 | + | yjeM | b4156 | 0.32 | +0.4 |
4,382,345 | - | yjeM | b4156 | 0.32 | +2.2 |
4,382,345 | - | yjeM | b4156 | 0.32 | +2.2 |
4,382,347 | + | yjeM | b4156 | 0.32 | +0.2 |
4,382,352 | + | yjeM | b4156 | 0.33 | -0.5 |
4,382,352 | + | yjeM | b4156 | 0.33 | -0.4 |
4,382,352 | + | yjeM | b4156 | 0.33 | +0.6 |
4,382,352 | + | yjeM | b4156 | 0.33 | +0.6 |
4,382,352 | + | yjeM | b4156 | 0.33 | +2.2 |
4,382,352 | + | yjeM | b4156 | 0.33 | -0.1 |
4,382,352 | + | yjeM | b4156 | 0.33 | +1.1 |
4,382,355 | + | yjeM | b4156 | 0.33 | +0.2 |
4,382,355 | - | yjeM | b4156 | 0.33 | +2.2 |
4,382,355 | - | yjeM | b4156 | 0.33 | +2.2 |
4,382,357 | + | yjeM | b4156 | 0.33 | +0.2 |
4,382,357 | + | yjeM | b4156 | 0.33 | -0.7 |
4,382,357 | + | yjeM | b4156 | 0.33 | -0.6 |
4,382,368 | - | yjeM | b4156 | 0.34 | +2.2 |
4,382,368 | - | yjeM | b4156 | 0.34 | +2.2 |
4,382,378 | + | yjeM | b4156 | 0.34 | -0.6 |
4,382,392 | - | yjeM | b4156 | 0.35 | +2.2 |
4,382,444 | - | yjeM | b4156 | 0.39 | +0.7 |
4,382,458 | + | yjeM | b4156 | 0.40 | +1.2 |
4,382,464 | + | yjeM | b4156 | 0.40 | +0.2 |
4,382,466 | - | yjeM | b4156 | 0.40 | +2.2 |
4,382,467 | + | yjeM | b4156 | 0.40 | +0.2 |
4,382,467 | - | yjeM | b4156 | 0.40 | +0.3 |
4,382,467 | - | yjeM | b4156 | 0.40 | -1.1 |
4,382,469 | - | yjeM | b4156 | 0.40 | +0.2 |
4,382,471 | - | yjeM | b4156 | 0.41 | -0.2 |
4,382,476 | - | yjeM | b4156 | 0.41 | -0.1 |
4,382,476 | - | yjeM | b4156 | 0.41 | -1.6 |
4,382,478 | + | yjeM | b4156 | 0.41 | +0.9 |
4,382,481 | - | yjeM | b4156 | 0.41 | -0.2 |
4,382,485 | - | yjeM | b4156 | 0.41 | +0.5 |
4,382,486 | - | yjeM | b4156 | 0.42 | -0.1 |
4,382,486 | - | yjeM | b4156 | 0.42 | -1.1 |
4,382,488 | + | yjeM | b4156 | 0.42 | +0.0 |
4,382,490 | - | yjeM | b4156 | 0.42 | +0.4 |
4,382,490 | - | yjeM | b4156 | 0.42 | +2.2 |
4,382,490 | - | yjeM | b4156 | 0.42 | +2.2 |
4,382,490 | - | yjeM | b4156 | 0.42 | +0.2 |
4,382,494 | - | yjeM | b4156 | 0.42 | +0.4 |
4,382,501 | - | yjeM | b4156 | 0.43 | +1.2 |
4,382,522 | + | yjeM | b4156 | 0.44 | +2.2 |
4,382,526 | + | yjeM | b4156 | 0.44 | +1.2 |
4,382,526 | + | yjeM | b4156 | 0.44 | -0.6 |
4,382,534 | - | yjeM | b4156 | 0.45 | -0.9 |
4,382,534 | - | yjeM | b4156 | 0.45 | +2.2 |
4,382,536 | + | yjeM | b4156 | 0.45 | -0.9 |
4,382,537 | + | yjeM | b4156 | 0.45 | +1.0 |
4,382,537 | + | yjeM | b4156 | 0.45 | -1.8 |
4,382,537 | + | yjeM | b4156 | 0.45 | +0.9 |
4,382,537 | + | yjeM | b4156 | 0.45 | +0.6 |
4,382,538 | + | yjeM | b4156 | 0.45 | -0.8 |
4,382,542 | + | yjeM | b4156 | 0.45 | -0.1 |
4,382,543 | + | yjeM | b4156 | 0.45 | -0.3 |
4,382,545 | - | yjeM | b4156 | 0.45 | +1.6 |
4,382,545 | - | yjeM | b4156 | 0.45 | +0.2 |
4,382,545 | - | yjeM | b4156 | 0.45 | +0.4 |
4,382,545 | - | yjeM | b4156 | 0.45 | +0.2 |
4,382,546 | - | yjeM | b4156 | 0.46 | +2.2 |
4,382,546 | - | yjeM | b4156 | 0.46 | +1.2 |
4,382,546 | - | yjeM | b4156 | 0.46 | +0.6 |
4,382,546 | - | yjeM | b4156 | 0.46 | +2.2 |
4,382,546 | - | yjeM | b4156 | 0.46 | +1.2 |
4,382,546 | - | yjeM | b4156 | 0.46 | +0.2 |
4,382,594 | + | yjeM | b4156 | 0.49 | -1.2 |
4,382,639 | + | yjeM | b4156 | 0.52 | +0.6 |
Or see this region's nucleotide sequence