Experiment: D-(+)-Turanose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0763 and Atu0764 are separated by 6 nucleotides Atu0764 and Atu0765 are separated by 192 nucleotides Atu0765 and Atu0766 are separated by 81 nucleotides
Atu0763: Atu0763 - hydrolase, at 758,871 to 759,545
Atu0763
Atu0764: Atu0764 - hypothetical protein, at 759,552 to 759,989
Atu0764
Atu0765: Atu0765 - TldD, at 760,182 to 761,597
Atu0765
Atu0766: Atu0766 - invasion associated locus B, at 761,679 to 762,203
Atu0766
Position (kb) 760
761
762 Strain fitness (log2 ratio) -2
-1
0
1
2 at 759.188 kb on + strand, within Atu0763 at 759.240 kb on + strand, within Atu0763 at 759.248 kb on + strand, within Atu0763 at 759.248 kb on - strand, within Atu0763 at 759.249 kb on + strand, within Atu0763 at 759.278 kb on + strand, within Atu0763 at 759.281 kb on - strand, within Atu0763 at 759.582 kb on + strand at 759.605 kb on - strand, within Atu0764 at 759.681 kb on + strand, within Atu0764 at 759.807 kb on + strand, within Atu0764 at 759.817 kb on + strand, within Atu0764 at 759.825 kb on - strand, within Atu0764 at 759.832 kb on + strand, within Atu0764 at 759.840 kb on - strand, within Atu0764 at 759.938 kb on - strand, within Atu0764 at 759.998 kb on - strand at 760.003 kb on - strand at 760.063 kb on + strand at 760.098 kb on + strand at 760.101 kb on - strand at 760.105 kb on + strand at 760.132 kb on - strand at 760.174 kb on + strand at 760.180 kb on + strand at 760.182 kb on - strand at 760.182 kb on - strand at 760.214 kb on - strand at 760.218 kb on + strand at 760.226 kb on - strand at 760.396 kb on + strand, within Atu0765 at 760.404 kb on - strand, within Atu0765 at 760.416 kb on - strand, within Atu0765 at 760.564 kb on + strand, within Atu0765 at 760.639 kb on - strand, within Atu0765 at 760.682 kb on - strand, within Atu0765 at 760.709 kb on - strand, within Atu0765 at 760.926 kb on - strand, within Atu0765 at 761.194 kb on - strand, within Atu0765 at 761.210 kb on + strand, within Atu0765 at 761.414 kb on + strand, within Atu0765 at 761.422 kb on - strand, within Atu0765 at 761.439 kb on - strand, within Atu0765 at 761.576 kb on - strand at 761.648 kb on - strand at 761.651 kb on + strand at 761.659 kb on - strand at 762.368 kb on + strand at 762.399 kb on - strand at 762.425 kb on + strand at 762.425 kb on + strand at 762.434 kb on - strand at 762.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-(+)-Turanose (C) remove 759,188 + Atu0763 0.47 -0.3 759,240 + Atu0763 0.55 -0.0 759,248 + Atu0763 0.56 -0.2 759,248 - Atu0763 0.56 +0.6 759,249 + Atu0763 0.56 -2.1 759,278 + Atu0763 0.60 +0.2 759,281 - Atu0763 0.61 +0.5 759,582 + +0.5 759,605 - Atu0764 0.12 -1.0 759,681 + Atu0764 0.29 +0.4 759,807 + Atu0764 0.58 -0.0 759,817 + Atu0764 0.61 -0.3 759,825 - Atu0764 0.62 -0.2 759,832 + Atu0764 0.64 -0.0 759,840 - Atu0764 0.66 +1.0 759,938 - Atu0764 0.88 +0.3 759,998 - +0.4 760,003 - +0.0 760,063 + +0.5 760,098 + -0.6 760,101 - +0.8 760,105 + +0.7 760,132 - -0.0 760,174 + -0.6 760,180 + +0.2 760,182 - -0.1 760,182 - +2.4 760,214 - +0.0 760,218 + -0.7 760,226 - +0.1 760,396 + Atu0765 0.15 +0.0 760,404 - Atu0765 0.16 +0.6 760,416 - Atu0765 0.17 +0.7 760,564 + Atu0765 0.27 +0.1 760,639 - Atu0765 0.32 +0.6 760,682 - Atu0765 0.35 -0.0 760,709 - Atu0765 0.37 +0.4 760,926 - Atu0765 0.53 -1.4 761,194 - Atu0765 0.71 +0.4 761,210 + Atu0765 0.73 +0.1 761,414 + Atu0765 0.87 +0.7 761,422 - Atu0765 0.88 +1.2 761,439 - Atu0765 0.89 -0.8 761,576 - -2.1 761,648 - -0.8 761,651 + -0.6 761,659 - -0.4 762,368 + -0.5 762,399 - +0.3 762,425 + +0.7 762,425 + +1.0 762,434 - +0.1 762,449 + -0.0
Or see this region's nucleotide sequence