Experiment: D-(+)-Turanose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3337 and Atu3338 are separated by 268 nucleotides Atu3338 and Atu3339 are separated by 63 nucleotides
Atu3337: Atu3337 - LacI family transcriptional regulator, at 371,196 to 372,209
Atu3337
Atu3338: Atu3338 - trehalose/maltose ABC transporter substrate-binding protein, at 372,478 to 373,743
Atu3338
Atu3339: Atu3339 - trehalose/maltose ABC transporter permease, at 373,807 to 374,781
Atu3339
Position (kb) 372
373
374 Strain fitness (log2 ratio) -2
-1
0
1 at 371.573 kb on + strand, within Atu3337 at 371.573 kb on + strand, within Atu3337 at 371.692 kb on + strand, within Atu3337 at 371.695 kb on - strand, within Atu3337 at 371.712 kb on + strand, within Atu3337 at 371.777 kb on - strand, within Atu3337 at 371.784 kb on + strand, within Atu3337 at 371.784 kb on + strand, within Atu3337 at 371.805 kb on - strand, within Atu3337 at 371.822 kb on - strand, within Atu3337 at 371.906 kb on + strand, within Atu3337 at 371.934 kb on + strand, within Atu3337 at 371.958 kb on - strand, within Atu3337 at 371.965 kb on + strand, within Atu3337 at 372.012 kb on + strand, within Atu3337 at 372.032 kb on + strand, within Atu3337 at 372.037 kb on + strand, within Atu3337 at 372.037 kb on + strand, within Atu3337 at 372.045 kb on - strand, within Atu3337 at 372.045 kb on - strand, within Atu3337 at 372.131 kb on + strand at 372.131 kb on + strand at 372.131 kb on + strand at 372.131 kb on + strand at 372.131 kb on + strand at 372.131 kb on + strand at 372.131 kb on + strand at 372.131 kb on + strand at 372.139 kb on - strand at 372.139 kb on - strand at 372.139 kb on - strand at 372.157 kb on - strand at 372.478 kb on - strand at 372.632 kb on + strand, within Atu3338 at 372.744 kb on + strand, within Atu3338 at 372.752 kb on - strand, within Atu3338 at 372.902 kb on - strand, within Atu3338 at 372.952 kb on + strand, within Atu3338 at 373.020 kb on - strand, within Atu3338 at 373.035 kb on - strand, within Atu3338 at 373.056 kb on - strand, within Atu3338 at 373.076 kb on - strand, within Atu3338 at 373.162 kb on + strand, within Atu3338 at 373.229 kb on + strand, within Atu3338 at 373.229 kb on + strand, within Atu3338 at 373.237 kb on - strand, within Atu3338 at 373.269 kb on + strand, within Atu3338 at 373.356 kb on - strand, within Atu3338 at 373.463 kb on + strand, within Atu3338 at 373.540 kb on + strand, within Atu3338 at 373.580 kb on + strand, within Atu3338 at 373.595 kb on + strand, within Atu3338 at 373.638 kb on + strand at 373.638 kb on + strand at 373.638 kb on + strand at 373.646 kb on - strand at 373.651 kb on + strand at 373.651 kb on + strand at 373.706 kb on + strand at 373.714 kb on - strand at 373.714 kb on - strand at 373.737 kb on - strand at 373.822 kb on + strand at 373.962 kb on - strand, within Atu3339 at 374.032 kb on - strand, within Atu3339 at 374.032 kb on - strand, within Atu3339 at 374.032 kb on - strand, within Atu3339 at 374.096 kb on + strand, within Atu3339 at 374.221 kb on - strand, within Atu3339 at 374.254 kb on + strand, within Atu3339 at 374.262 kb on - strand, within Atu3339 at 374.286 kb on + strand, within Atu3339 at 374.315 kb on + strand, within Atu3339 at 374.467 kb on - strand, within Atu3339 at 374.492 kb on - strand, within Atu3339 at 374.572 kb on - strand, within Atu3339 at 374.592 kb on + strand, within Atu3339 at 374.622 kb on + strand, within Atu3339 at 374.622 kb on + strand, within Atu3339 at 374.630 kb on - strand, within Atu3339 at 374.630 kb on - strand, within Atu3339
Per-strain Table
Position Strand Gene LocusTag Fraction D-(+)-Turanose (C) remove 371,573 + Atu3337 0.37 +0.1 371,573 + Atu3337 0.37 -1.1 371,692 + Atu3337 0.49 -0.4 371,695 - Atu3337 0.49 +0.1 371,712 + Atu3337 0.51 +0.8 371,777 - Atu3337 0.57 +0.1 371,784 + Atu3337 0.58 +0.3 371,784 + Atu3337 0.58 -0.9 371,805 - Atu3337 0.60 +0.4 371,822 - Atu3337 0.62 -0.5 371,906 + Atu3337 0.70 -0.3 371,934 + Atu3337 0.73 -1.0 371,958 - Atu3337 0.75 +0.1 371,965 + Atu3337 0.76 -0.1 372,012 + Atu3337 0.80 -0.6 372,032 + Atu3337 0.82 -0.2 372,037 + Atu3337 0.83 -0.1 372,037 + Atu3337 0.83 +0.2 372,045 - Atu3337 0.84 -1.5 372,045 - Atu3337 0.84 -0.6 372,131 + +0.2 372,131 + -0.2 372,131 + -0.1 372,131 + -0.1 372,131 + -0.5 372,131 + +0.4 372,131 + -0.4 372,131 + -0.9 372,139 - +0.2 372,139 - -0.0 372,139 - -0.2 372,157 - +1.5 372,478 - -1.1 372,632 + Atu3338 0.12 -1.3 372,744 + Atu3338 0.21 -1.2 372,752 - Atu3338 0.22 -1.4 372,902 - Atu3338 0.33 -2.2 372,952 + Atu3338 0.37 -1.1 373,020 - Atu3338 0.43 -1.5 373,035 - Atu3338 0.44 -0.8 373,056 - Atu3338 0.46 -1.7 373,076 - Atu3338 0.47 -1.7 373,162 + Atu3338 0.54 -0.5 373,229 + Atu3338 0.59 -1.0 373,229 + Atu3338 0.59 -0.6 373,237 - Atu3338 0.60 -1.2 373,269 + Atu3338 0.62 -1.1 373,356 - Atu3338 0.69 -2.6 373,463 + Atu3338 0.78 -0.9 373,540 + Atu3338 0.84 -0.7 373,580 + Atu3338 0.87 -1.1 373,595 + Atu3338 0.88 -0.8 373,638 + -0.7 373,638 + -0.4 373,638 + -0.6 373,646 - -0.4 373,651 + -0.5 373,651 + -0.5 373,706 + -1.9 373,714 - -0.1 373,714 - -1.9 373,737 - -1.5 373,822 + -1.0 373,962 - Atu3339 0.16 -0.5 374,032 - Atu3339 0.23 -1.0 374,032 - Atu3339 0.23 -1.3 374,032 - Atu3339 0.23 -1.3 374,096 + Atu3339 0.30 -0.4 374,221 - Atu3339 0.42 -1.4 374,254 + Atu3339 0.46 -0.4 374,262 - Atu3339 0.47 -1.1 374,286 + Atu3339 0.49 -0.3 374,315 + Atu3339 0.52 -1.7 374,467 - Atu3339 0.68 +0.2 374,492 - Atu3339 0.70 -1.2 374,572 - Atu3339 0.78 -0.7 374,592 + Atu3339 0.81 -1.2 374,622 + Atu3339 0.84 -1.0 374,622 + Atu3339 0.84 -0.4 374,630 - Atu3339 0.84 -0.4 374,630 - Atu3339 0.84 -2.3
Or see this region's nucleotide sequence